RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 STARD7Q9NQZ5 370 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 CYP39A1Q9NYL5 469 aa18.44■□□□□ 0.54
CLDN11-204ENST00000477531 ADD3Q9UEY8 706 aaKnown RBP18.44■□□□□ 0.54
CLDN11-204ENST00000477531 SOWAHBA6NEL2 793 aa18.43■□□□□ 0.54
CLDN11-204ENST00000477531 PDE4AP27815 886 aa18.43■□□□□ 0.54
CLDN11-204ENST00000477531 ACLYP53396 1101 aa18.43■□□□□ 0.54
CLDN11-204ENST00000477531 TLE2Q04725 743 aa18.43■□□□□ 0.54
CLDN11-204ENST00000477531 KCNA10Q16322 511 aa18.43■□□□□ 0.54
CLDN11-204ENST00000477531 LRIT3Q3SXY7 679 aa18.43■□□□□ 0.54
CLDN11-204ENST00000477531 RAD50Q92878 1312 aa18.43■□□□□ 0.54
CLDN11-204ENST00000477531 SZT2Q5T011 3432 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 PTPDC1A2A3K4 754 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 SOX1O00570 391 aaPredicted RBP18.42■□□□□ 0.54
CLDN11-204ENST00000477531 SNHG28P0DPA3 235 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 TNFAIP2Q03169 654 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 GNASQ5JWF2 1037 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 PNMA1Q8ND90 353 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 LRCH3Q96II8 777 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 GLT1D1Q96MS3 346 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 ZSCAN10Q96SZ4 725 aaPredicted RBP18.42■□□□□ 0.54
CLDN11-204ENST00000477531 UBAC1Q9BSL1 405 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 ZSWIM5Q9P217 1185 aa18.42■□□□□ 0.54
CLDN11-204ENST00000477531 PQBP1O60828 265 aaKnown RBP18.41■□□□□ 0.54
CLDN11-204ENST00000477531 GSPT1P15170 499 aaKnown RBP18.41■□□□□ 0.54
CLDN11-204ENST00000477531 CST5P28325 142 aaPredicted RBP18.41■□□□□ 0.54
CLDN11-204ENST00000477531 GJA9P57773 515 aa18.41■□□□□ 0.54
CLDN11-204ENST00000477531 TRDNQ13061 729 aa18.41■□□□□ 0.54
CLDN11-204ENST00000477531 BAATQ14032 418 aaPredicted RBP18.41■□□□□ 0.54
CLDN11-204ENST00000477531 GPR153Q6NV75 609 aa18.41■□□□□ 0.54
CLDN11-204ENST00000477531 MPHOSPH6Q99547 160 aaKnown RBP18.41■□□□□ 0.54
CLDN11-204ENST00000477531 AP5M1Q9H0R1 490 aa18.41■□□□□ 0.54
CLDN11-204ENST00000477531 PDLIM7Q9NR12 457 aa18.41■□□□□ 0.54
CLDN11-204ENST00000477531 LAMA3Q16787 3333 aa18.41■□□□□ 0.54
CLDN11-204ENST00000477531 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 DCDC2CA8MYV0 355 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 CLTBP09497 229 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
CLDN11-204ENST00000477531 IQSEC1Q6DN90 963 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 ANKS1AQ92625 1134 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 KATNBL1Q9H079 304 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 UPF3AQ9H1J1 476 aaKnown RBP18.4■□□□□ 0.54
CLDN11-204ENST00000477531 MCM3APO60318 1980 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 ELP1O95163 1332 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 MROH7Q68CQ1 1323 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 WDR19Q8NEZ3 1342 aa18.4■□□□□ 0.54
CLDN11-204ENST00000477531 NFIBO00712 420 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 ZEB2O60315 1214 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 ASGR1P07306 291 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 GOLGA8HP0CJ92 632 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 CALML3P27482 149 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 ASPRV1Q53RT3 343 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 RNF207Q6ZRF8 634 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 BADQ92934 168 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 TOX2Q96NM4 488 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 VTA1Q9NP79 307 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 TMEM39AQ9NV64 488 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
CLDN11-204ENST00000477531 TNKSO95271 1327 aa18.39■□□□□ 0.53
CLDN11-204ENST00000477531 MYADML2A6NDP7 307 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 B4DLN1 442 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 ADCY6O43306 1168 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 DHX16O60231 1041 aaKnown RBP18.38■□□□□ 0.53
CLDN11-204ENST00000477531 PARP1P09874 1014 aaKnown RBP18.38■□□□□ 0.53
CLDN11-204ENST00000477531 RAG1P15918 1043 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 CHMLP26374 656 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 ALDH5A1P51649 535 aaPredicted RBP18.38■□□□□ 0.53
CLDN11-204ENST00000477531 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
CLDN11-204ENST00000477531 IFIT1BQ5T764 474 aaKnown RBP18.38■□□□□ 0.53
CLDN11-204ENST00000477531 CCSAPQ6IQ19 270 aaPredicted RBP18.38■□□□□ 0.53
CLDN11-204ENST00000477531 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 EEPD1Q7L9B9 569 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 ANKRD33Q7Z3H0 272 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 ENAHQ8N8S7 591 aaPredicted RBP18.38■□□□□ 0.53
CLDN11-204ENST00000477531 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
CLDN11-204ENST00000477531 LAMA4Q16363 1823 aa18.37■□□□□ 0.53
CLDN11-204ENST00000477531 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
CLDN11-204ENST00000477531 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
CLDN11-204ENST00000477531 TRIM43BA6NCK2 446 aa18.37■□□□□ 0.53
CLDN11-204ENST00000477531 DYNC1LI2O43237 492 aaPredicted RBP18.37■□□□□ 0.53
CLDN11-204ENST00000477531 USH1GQ495M9 461 aa18.37■□□□□ 0.53
CLDN11-204ENST00000477531 SH3RF1Q7Z6J0 888 aa18.37■□□□□ 0.53
CLDN11-204ENST00000477531 TLK2Q86UE8 772 aa18.37■□□□□ 0.53
CLDN11-204ENST00000477531 FBXO16Q8IX29 292 aaPredicted RBP18.37■□□□□ 0.53
CLDN11-204ENST00000477531 CLEC4DQ8WXI8 215 aa18.37■□□□□ 0.53
CLDN11-204ENST00000477531 TRIM43Q96BQ3 446 aaPredicted RBP18.37■□□□□ 0.53
CLDN11-204ENST00000477531 Q9Y3F1 56 aa18.37■□□□□ 0.53
CLDN11-204ENST00000477531 ASTN1O14525 1302 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 KIAA0355O15063 1070 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 CABYRO75952 493 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
CLDN11-204ENST00000477531 NKX3-2P78367 333 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 PDE4DQ08499 809 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 CDC37Q16543 378 aaPredicted RBP18.36■□□□□ 0.53
CLDN11-204ENST00000477531 FSCN1Q16658 493 aaKnown RBP18.36■□□□□ 0.53
CLDN11-204ENST00000477531 MORC4Q8TE76 937 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 PURBQ96QR8 312 aaKnown RBP18.36■□□□□ 0.53
CLDN11-204ENST00000477531 IL25Q9H293 177 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 PDGFCQ9NRA1 345 aa18.36■□□□□ 0.53
CLDN11-204ENST00000477531 GNEQ9Y223 722 aaKnown RBP18.36■□□□□ 0.53
CLDN11-204ENST00000477531 ABCB11O95342 1321 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms