RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 GJD2Q9UKL4 321 aa11.75□□□□□ -0.53
TRAIP-205ENST00000475495 CCPG1Q9ULG6 757 aa11.75□□□□□ -0.53
TRAIP-205ENST00000475495 PLXNA1Q9UIW2 1896 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 CCDC196A0A1B0GTZ2 297 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 RGS2P41220 211 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 FLT3LGP49771 235 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 SNAP25P60880 206 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 PRKCZQ05513 592 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 TRAF1Q13077 416 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 CUL4AQ13619 759 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 GRB14Q14449 540 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 CDC37Q16543 378 aaPredicted RBP11.74□□□□□ -0.53
TRAIP-205ENST00000475495 MORN1Q5T089 497 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAIP-205ENST00000475495 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 AGBL1Q96MI9 1066 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 SPZ1Q9BXG8 430 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 ALDH8A1Q9H2A2 487 aaPredicted RBP11.74□□□□□ -0.53
TRAIP-205ENST00000475495 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 RIOX1Q9H6W3 641 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 JMJD4Q9H9V9 463 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 VAT1LQ9HCJ6 419 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 SLC5A4Q9NY91 659 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 NAP1L2Q9ULW6 460 aaPredicted RBP11.74□□□□□ -0.53
TRAIP-205ENST00000475495 GABRQQ9UN88 632 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 RIPK3Q9Y572 518 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 ZNF536O15090 1300 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 ZNF236Q9UL36 1845 aa11.74□□□□□ -0.53
TRAIP-205ENST00000475495 FSD2A1L4K1 749 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 XRCC5P13010 732 aaKnown RBP11.73□□□□□ -0.53
TRAIP-205ENST00000475495 ALAS1P13196 640 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 PDIA4P13667 645 aaKnown RBP11.73□□□□□ -0.53
TRAIP-205ENST00000475495 RXRAP19793 462 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 ADORA2AP29274 412 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 MRE11P49959 708 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 NEK4P51957 841 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 EVCP57679 992 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 MAP2K5Q13163 448 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
TRAIP-205ENST00000475495 KCTD2Q14681 263 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 ANKRD1Q15327 319 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 RTN1Q16799 776 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 NBPF11Q86T75 865 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 DPP9Q86TI2 863 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 TRMT44Q8IYL2 757 aaKnown RBP11.73□□□□□ -0.53
TRAIP-205ENST00000475495 PXYLP1Q8TE99 480 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 USP6NLQ92738 828 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 MTMR8Q96EF0 704 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 TRERF1Q96PN7 1200 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 MMP19Q99542 508 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 ACAD9Q9H845 621 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 HOMER2Q9NSB8 354 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
TRAIP-205ENST00000475495 PNMA6FA0A0J9YX94 578 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 GOLGA8AA7E2F4 631 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 GOLGA8BA8MQT2 603 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 ZBTB5O15062 677 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 ADCY3O60266 1144 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 GRK4P32298 578 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 METAP2P50579 478 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAIP-205ENST00000475495 QRICH1Q2TAL8 776 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 SLC9C1Q4G0N8 1177 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 TMTC3Q6ZXV5 915 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 FBXO11Q86XK2 927 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 ANKRD35Q8N283 1001 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 RRP36Q96EU6 259 aaKnown RBP11.72□□□□□ -0.53
TRAIP-205ENST00000475495 DDX11Q96FC9 970 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
TRAIP-205ENST00000475495 APBA2Q99767 749 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 MAF1Q9H063 256 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 RNF146Q9NTX7 359 aa11.72□□□□□ -0.53
TRAIP-205ENST00000475495 TNRC18O15417 2968 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 PFASO15067 1338 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 ABCB11O95342 1321 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 CYTH3O43739 400 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 BAG4O95429 457 aaKnown RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 HOXC6P09630 235 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 CYP2B6P20813 491 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 PDIA3P30101 505 aaKnown RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 SRBD1Q8N5C6 995 aaKnown RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 TMX3Q96JJ7 454 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 PIGSQ96S52 555 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 AMNQ9BXJ7 453 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
TRAIP-205ENST00000475495 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 MRPL11Q9Y3B7 192 aaKnown RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
TRAIP-205ENST00000475495 MCM3APO60318 1980 aa11.7□□□□□ -0.54
TRAIP-205ENST00000475495 NID2Q14112 1375 aa11.7□□□□□ -0.54
TRAIP-205ENST00000475495 HTTP42858 3142 aa11.7□□□□□ -0.54
TRAIP-205ENST00000475495 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
TRAIP-205ENST00000475495 SLC35G1Q2M3R5 365 aa11.7□□□□□ -0.54
TRAIP-205ENST00000475495 USH1GQ495M9 461 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms