RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CTNNA3Q9UI47 895 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 ZMYND8Q9ULU4 1186 aaPredicted RBP11.09□□□□□ -0.63
PDPN-204ENST00000475043 CNPY2Q9Y2B0 182 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 B4E1Z4 1266 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 DNM1LO00429 736 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 PLA2G6O60733 806 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 PPP1R37O75864 691 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 SLC34A2O95436 690 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 COL6A1P12109 1028 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 TAL1P17542 331 aaPredicted RBP11.08□□□□□ -0.64
PDPN-204ENST00000475043 SYN1P17600 705 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 RUFY2Q8WXA3 655 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 TTC14Q96N46 770 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 IL25Q9H293 177 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 ACAD9Q9H845 621 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 RNF146Q9NTX7 359 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 RBM27Q9P2N5 1060 aaKnown RBP11.08□□□□□ -0.64
PDPN-204ENST00000475043 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 ZNF536O15090 1300 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
PDPN-204ENST00000475043 DNAJC25-GNG10A0A024R161 153 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 RARBP10826 455 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 PDHBP11177 359 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 AKR1A1P14550 325 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 MMRN1Q13201 1228 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 LRRC26Q2I0M4 334 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 TKFCQ3LXA3 575 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 MSL3Q8N5Y2 521 aaKnown RBP11.07□□□□□ -0.64
PDPN-204ENST00000475043 KRT23Q9C075 422 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 XPNPEP3Q9NQH7 507 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 NRBP1Q9UHY1 535 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 ZHX1Q9UKY1 873 aaPredicted RBP11.07□□□□□ -0.64
PDPN-204ENST00000475043 RAD50Q92878 1312 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 MCM3APO60318 1980 aa11.07□□□□□ -0.64
PDPN-204ENST00000475043 ZNF865P0CJ78 1059 aaPredicted RBP11.06□□□□□ -0.64
PDPN-204ENST00000475043 CHMLP26374 656 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 LRRC41Q15345 812 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 MAMDC4Q6UXC1 1216 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDPN-204ENST00000475043 DGKHQ86XP1 1220 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 ZSCAN10Q96SZ4 725 aaPredicted RBP11.06□□□□□ -0.64
PDPN-204ENST00000475043 RANBP17Q9H2T7 1088 aaKnown RBP11.06□□□□□ -0.64
PDPN-204ENST00000475043 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 A1CFQ9NQ94 594 aaKnown RBP11.06□□□□□ -0.64
PDPN-204ENST00000475043 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
PDPN-204ENST00000475043 SNAI1O95863 264 aaPredicted RBP11.05□□□□□ -0.64
PDPN-204ENST00000475043 PGK1P00558 417 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 ICAM1P05362 532 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 GOLGA8HP0CJ92 632 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 ADCYAP1R1P41586 468 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 NT5C2P49902 561 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 TRDNQ13061 729 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 ACVR2BQ13705 512 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 MUM1L1Q5H9M0 696 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 BTNL9Q6UXG8 535 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 NSMFQ6X4W1 530 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 ARMCX2Q7L311 632 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 RNF180Q86T96 592 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 FERMT2Q96AC1 680 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 LENG1Q96BZ8 264 aaPredicted RBP11.05□□□□□ -0.64
PDPN-204ENST00000475043 UBAC1Q9BSL1 405 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 ABHD16BQ9H3Z7 469 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.05□□□□□ -0.64
PDPN-204ENST00000475043 FAM184BQ9ULE4 1060 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 TNKSO95271 1327 aa11.05□□□□□ -0.64
PDPN-204ENST00000475043 PTH1RQ03431 593 aa11.04□□□□□ -0.64
PDPN-204ENST00000475043 ARSIQ5FYB1 569 aa11.04□□□□□ -0.64
PDPN-204ENST00000475043 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
PDPN-204ENST00000475043 GPATCH4Q5T3I0 446 aaKnown RBP11.04□□□□□ -0.64
PDPN-204ENST00000475043 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
PDPN-204ENST00000475043 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
PDPN-204ENST00000475043 FGD4Q96M96 766 aa11.04□□□□□ -0.64
PDPN-204ENST00000475043 CYP39A1Q9NYL5 469 aa11.04□□□□□ -0.64
PDPN-204ENST00000475043 ATP11BQ9Y2G3 1177 aa11.04□□□□□ -0.64
PDPN-204ENST00000475043 MYH6P13533 1939 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 PTPDC1A2A3K4 754 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 SOWAHBA6NEL2 793 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 ASB14A6NK59 587 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 SGSM2O43147 1006 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 DHX16O60231 1041 aaKnown RBP11.03□□□□□ -0.64
PDPN-204ENST00000475043 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
PDPN-204ENST00000475043 FXR1P51114 621 aaKnown RBP eCLIP11.03□□□□□ -0.64
PDPN-204ENST00000475043 RTP1P59025 263 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 CCDC144BQ3MJ40 725 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 IFIT1BQ5T764 474 aaKnown RBP11.03□□□□□ -0.64
PDPN-204ENST00000475043 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms