RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 LMNB1P20700 586 aa9□□□□□ -0.97
VPS50-211ENST00000474412 GSTT1P30711 240 aa9□□□□□ -0.97
VPS50-211ENST00000474412 DUSP27Q5VZP5 1158 aa9□□□□□ -0.97
VPS50-211ENST00000474412 COPS6Q7L5N1 327 aa9□□□□□ -0.97
VPS50-211ENST00000474412 MASTLQ96GX5 879 aa9□□□□□ -0.97
VPS50-211ENST00000474412 GZF1Q9H116 711 aaPredicted RBP9□□□□□ -0.97
VPS50-211ENST00000474412 MRS2Q9HD23 443 aa9□□□□□ -0.97
VPS50-211ENST00000474412 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
VPS50-211ENST00000474412 POLR2AP24928 1970 aaKnown RBP8.99□□□□□ -0.97
VPS50-211ENST00000474412 ELL2O00472 640 aaPredicted RBP8.99□□□□□ -0.97
VPS50-211ENST00000474412 NPR1P16066 1061 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 USP11P51784 963 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 CRY2Q49AN0 593 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 BEND4Q6ZU67 534 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 TSPYL6Q8N831 410 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 C8orf58Q8NAV2 365 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 OSBPL7Q9BZF2 842 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 ZC3H12CQ9C0D7 883 aaKnown RBP8.99□□□□□ -0.97
VPS50-211ENST00000474412 TAOK3Q9H2K8 898 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 PHAXQ9H814 394 aaKnown RBP8.99□□□□□ -0.97
VPS50-211ENST00000474412 DDX21Q9NR30 783 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS50-211ENST00000474412 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 AP4E1Q9UPM8 1137 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 ZNF541Q9H0D2 1346 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 LTBP3Q9NS15 1303 aa8.99□□□□□ -0.97
VPS50-211ENST00000474412 MYH13Q9UKX3 1938 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 TCERG1O14776 1098 aaKnown RBP8.98□□□□□ -0.97
VPS50-211ENST00000474412 GSC2O15499 205 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 ADH5P11766 374 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 FGD1P98174 961 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 HNRNPUQ00839 825 aaKnown RBP eCLIP8.98□□□□□ -0.97
VPS50-211ENST00000474412 SOX4Q06945 474 aaPredicted RBP8.98□□□□□ -0.97
VPS50-211ENST00000474412 COL19A1Q14993 1142 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 SGO2Q562F6 1265 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 EAPPQ56P03 285 aaPredicted RBP8.98□□□□□ -0.97
VPS50-211ENST00000474412 TPTE2Q6XPS3 522 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 NLRP10Q86W26 655 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 CLEC10AQ8IUN9 316 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 TRIM42Q8IWZ5 723 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 C12orf49Q9H741 205 aa8.98□□□□□ -0.97
VPS50-211ENST00000474412 SCO2A0A1W2PP80 73 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 HMX2A2RU54 273 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 IGLV1-40P01703 118 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 MAP4P27816 1152 aaKnown RBP8.97□□□□□ -0.97
VPS50-211ENST00000474412 HTRA3P83110 453 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 CCDC93Q567U6 631 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 C3orf58Q8NDZ4 430 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 YIPF2Q9BWQ6 316 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 NYXQ9GZU5 481 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 ZNF277Q9NRM2 450 aaPredicted RBP8.97□□□□□ -0.97
VPS50-211ENST00000474412 ABCC4O15439 1325 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
VPS50-211ENST00000474412 ECM29Q5VYK3 1845 aa8.96□□□□□ -0.97
VPS50-211ENST00000474412 ANP32CO43423 234 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 PRPF40AO75400 957 aaKnown RBP8.96□□□□□ -0.98
VPS50-211ENST00000474412 HOXB7P09629 217 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 HCLS1P14317 486 aaPredicted RBP8.96□□□□□ -0.98
VPS50-211ENST00000474412 GNAI1P63096 354 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 CCDC27Q2M243 656 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 SULF2Q8IWU5 870 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 C2CD4AQ8NCU7 369 aaPredicted RBP8.96□□□□□ -0.98
VPS50-211ENST00000474412 FAM83CQ9BQN1 747 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 FAM8A1Q9UBU6 413 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 PPM1HQ9ULR3 514 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 KDM2BQ8NHM5 1336 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 FANCIQ9NVI1 1328 aa8.96□□□□□ -0.98
VPS50-211ENST00000474412 GLTPD2A6NH11 291 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 DDNO94850 711 aaPredicted RBP8.95□□□□□ -0.98
VPS50-211ENST00000474412 GSTP1P09211 210 aaKnown RBP8.95□□□□□ -0.98
VPS50-211ENST00000474412 USP17L7P0C7H9 530 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 HSPA6P17066 643 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 LIG1P18858 919 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 GNA15P30679 374 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 NFIAQ12857 509 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 TCIRG1Q13488 830 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 PARP10Q53GL7 1025 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 DYMQ7RTS9 669 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 PLBD2Q8NHP8 589 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 RPGRQ92834 1020 aaKnown RBP8.95□□□□□ -0.98
VPS50-211ENST00000474412 KCNB2Q92953 911 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 FRMD6Q96NE9 622 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 ISCA1Q9BUE6 129 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 WDR18Q9BV38 432 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 UTP14AQ9BVJ6 771 aaKnown RBP8.95□□□□□ -0.98
VPS50-211ENST00000474412 CEP44Q9C0F1 390 aa8.95□□□□□ -0.98
VPS50-211ENST00000474412 CCDC86Q9H6F5 360 aaKnown RBP8.95□□□□□ -0.98
VPS50-211ENST00000474412 DBF4Q9UBU7 674 aaPredicted RBP8.95□□□□□ -0.98
VPS50-211ENST00000474412 THSD7BQ9C0I4 1608 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 AOC2O75106 756 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 FBXO24O75426 580 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 TOMM70O94826 608 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 RAB6AP20340 208 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 RNF43Q68DV7 783 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 G2E3Q7L622 706 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 PPP1R42Q7Z4L9 355 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 FBLIM1Q8WUP2 373 aa8.94□□□□□ -0.98
VPS50-211ENST00000474412 JARID2Q92833 1246 aaPredicted RBP8.94□□□□□ -0.98
VPS50-211ENST00000474412 DUSP9Q99956 384 aaKnown RBP8.94□□□□□ -0.98
VPS50-211ENST00000474412 TRMT112Q9UI30 125 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms