RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 COL25A1Q9BXS0 654 aaPredicted RBP18.3■□□□□ 0.52
CLIC3-201ENST00000473911 RANBP17Q9H2T7 1088 aaKnown RBP18.3■□□□□ 0.52
CLIC3-201ENST00000473911 ICAM1P05362 532 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 EPHB4P54760 987 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 BTNL9Q6UXG8 535 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 NSMFQ6X4W1 530 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 CCDC144CPQ8IYA2 1237 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 FGD4Q96M96 766 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 ABHD16BQ9H3Z7 469 aa18.29■□□□□ 0.52
CLIC3-201ENST00000473911 B4E1Z4 1266 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 TLE2Q04725 743 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 DGKHQ86XP1 1220 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 FAM133AQ8N9E0 248 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 RUFY2Q8WXA3 655 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 PHF24Q9UPV7 400 aa18.28■□□□□ 0.52
CLIC3-201ENST00000473911 SYNRGQ9UMZ2 1314 aa18.27■□□□□ 0.52
CLIC3-201ENST00000473911 ASB14A6NK59 587 aa18.27■□□□□ 0.52
CLIC3-201ENST00000473911 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.52
CLIC3-201ENST00000473911 CCDC144BQ3MJ40 725 aa18.27■□□□□ 0.52
CLIC3-201ENST00000473911 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
CLIC3-201ENST00000473911 CDX2Q99626 313 aaPredicted RBP18.27■□□□□ 0.52
CLIC3-201ENST00000473911 KRT23Q9C075 422 aa18.27■□□□□ 0.52
CLIC3-201ENST00000473911 TTYH1Q9H313 450 aaPredicted RBP18.27■□□□□ 0.52
CLIC3-201ENST00000473911 CNNM2Q9H8M5 875 aa18.27■□□□□ 0.52
CLIC3-201ENST00000473911 SPC25Q9HBM1 224 aa18.27■□□□□ 0.52
CLIC3-201ENST00000473911 CYP39A1Q9NYL5 469 aa18.27■□□□□ 0.52
CLIC3-201ENST00000473911 RAD50Q92878 1312 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 SOWAHBA6NEL2 793 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 ADAMTS4O75173 837 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 DUSP11O75319 330 aaKnown RBP18.26■□□□□ 0.51
CLIC3-201ENST00000473911 GPATCH4Q5T3I0 446 aaKnown RBP18.26■□□□□ 0.51
CLIC3-201ENST00000473911 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 ZSCAN10Q96SZ4 725 aaPredicted RBP18.26■□□□□ 0.51
CLIC3-201ENST00000473911 UBAC1Q9BSL1 405 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 TSEN34Q9BSV6 310 aaKnown RBP18.26■□□□□ 0.51
CLIC3-201ENST00000473911 IL25Q9H293 177 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 SEMA6BQ9H3T3 888 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 PNMA2Q9UL42 364 aa18.26■□□□□ 0.51
CLIC3-201ENST00000473911 A0A1W2PQ45 241 aaPredicted RBP18.25■□□□□ 0.51
CLIC3-201ENST00000473911 A0A1W2PQY0 241 aa18.25■□□□□ 0.51
CLIC3-201ENST00000473911 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
CLIC3-201ENST00000473911 GOLGA8HP0CJ92 632 aa18.25■□□□□ 0.51
CLIC3-201ENST00000473911 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
CLIC3-201ENST00000473911 ZNF697Q5TEC3 545 aa18.25■□□□□ 0.51
CLIC3-201ENST00000473911 C1orf53Q5VUE5 145 aa18.25■□□□□ 0.51
CLIC3-201ENST00000473911 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
CLIC3-201ENST00000473911 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
CLIC3-201ENST00000473911 ZSWIM5Q9P217 1185 aa18.25■□□□□ 0.51
CLIC3-201ENST00000473911 CHD9Q3L8U1 2897 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 MOXD2PA6NHM9 499 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 CHMLP26374 656 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 ACLYP53396 1101 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 KCNA10Q16322 511 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
CLIC3-201ENST00000473911 STARD7Q9NQZ5 370 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 MCM3APO60318 1980 aa18.24■□□□□ 0.51
CLIC3-201ENST00000473911 TNKSO95271 1327 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 MYADML2A6NDP7 307 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 NFIBO00712 420 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 ADCY6O43306 1168 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 PQBP1O60828 265 aaKnown RBP18.23■□□□□ 0.51
CLIC3-201ENST00000473911 TNFAIP2Q03169 654 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 TRDNQ13061 729 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 BAATQ14032 418 aaPredicted RBP18.23■□□□□ 0.51
CLIC3-201ENST00000473911 KLHDC9Q8NEP7 349 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 MYLIPQ8WY64 445 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 UBA5Q9GZZ9 404 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
CLIC3-201ENST00000473911 ADD3Q9UEY8 706 aaKnown RBP18.23■□□□□ 0.51
CLIC3-201ENST00000473911 CALML3P27482 149 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 GJA9P57773 515 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 GNASQ5JWF2 1037 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 IFIT1BQ5T764 474 aaKnown RBP18.22■□□□□ 0.51
CLIC3-201ENST00000473911 EEPD1Q7L9B9 569 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 PCSK9Q8NBP7 692 aaKnown RBP18.22■□□□□ 0.51
CLIC3-201ENST00000473911 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 VTI1AQ96AJ9 217 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 PURBQ96QR8 312 aaKnown RBP18.22■□□□□ 0.51
CLIC3-201ENST00000473911 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
CLIC3-201ENST00000473911 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
CLIC3-201ENST00000473911 ASTN1O14525 1302 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
CLIC3-201ENST00000473911 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.21■□□□□ 0.51
CLIC3-201ENST00000473911 DHX16O60231 1041 aaKnown RBP18.21■□□□□ 0.51
CLIC3-201ENST00000473911 CLTBP09497 229 aa18.21■□□□□ 0.51
CLIC3-201ENST00000473911 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
CLIC3-201ENST00000473911 PTH1RQ03431 593 aa18.21■□□□□ 0.51
CLIC3-201ENST00000473911 USH1GQ495M9 461 aa18.21■□□□□ 0.51
CLIC3-201ENST00000473911 ASPRV1Q53RT3 343 aa18.21■□□□□ 0.51
CLIC3-201ENST00000473911 CCSAPQ6IQ19 270 aaPredicted RBP18.21■□□□□ 0.51
CLIC3-201ENST00000473911 RNF207Q6ZRF8 634 aa18.21■□□□□ 0.51
CLIC3-201ENST00000473911 FBXO16Q8IX29 292 aaPredicted RBP18.21■□□□□ 0.51
CLIC3-201ENST00000473911 CLEC4DQ8WXI8 215 aa18.21■□□□□ 0.51
CLIC3-201ENST00000473911 GLT1D1Q96MS3 346 aa18.21■□□□□ 0.51
CLIC3-201ENST00000473911 UPF3AQ9H1J1 476 aaKnown RBP18.21■□□□□ 0.51
CLIC3-201ENST00000473911 CPVLQ9H3G5 476 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms