RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 SYDE2Q5VT97 1194 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 FAM83AQ86UY5 434 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 SMYD4Q8IYR2 804 aaPredicted RBP7.07□□□□□ -1.28
CLK1-210ENST00000473565 TRIM5Q9C035 493 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 MAN1B1Q9UKM7 699 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 ESPNB1AK53 854 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 NEMFO60524 1076 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 COBLO75128 1261 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 HOXA13P31271 388 aaPredicted RBP7.07□□□□□ -1.28
CLK1-210ENST00000473565 INPP5BP32019 993 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 TECP42680 631 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 PTPN21Q16825 1174 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 ANGEL2Q5VTE6 544 aaKnown RBP7.07□□□□□ -1.28
CLK1-210ENST00000473565 CCDC174Q6PII3 467 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 DTHD1Q6ZMT9 781 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 GMCL1P1Q8NEA9 526 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 PAGE5Q96GU1 130 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 MTRQ99707 1265 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 TTC12Q9H892 705 aaPredicted RBP7.07□□□□□ -1.28
CLK1-210ENST00000473565 PSTPIP2Q9H939 334 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 RIC8AQ9NPQ8 531 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.07□□□□□ -1.28
CLK1-210ENST00000473565 NRBP1Q9UHY1 535 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
CLK1-210ENST00000473565 ESYT2A0FGR8 921 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 TXKP42681 527 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 PRKG1Q13976 671 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 E2F4Q16254 413 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 FKBP1CQ5VVH2 108 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 TRMT44Q8IYL2 757 aaKnown RBP7.06□□□□□ -1.28
CLK1-210ENST00000473565 RASSF8Q8NHQ8 419 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 TBC1D5Q92609 795 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 CUL5Q93034 780 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 GMCL1Q96IK5 515 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 FEZ1Q99689 392 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 ZNF341Q9BYN7 854 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 DEFB129Q9H1M3 183 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 TMX2Q9Y320 296 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 POLR2AP24928 1970 aaKnown RBP7.06□□□□□ -1.28
CLK1-210ENST00000473565 PHF20L1A8MW92 1017 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 OR52Z1P0C646 297 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 ATP1A3P13637 1013 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 LMOD1P29536 600 aaPredicted RBP7.06□□□□□ -1.28
CLK1-210ENST00000473565 EPS15P42566 896 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 ZNF75DP51815 510 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 SPON1Q9HCB6 807 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 LTBP3Q9NS15 1303 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 ATAD5Q96QE3 1844 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 CUL4BQ13620 913 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 NCAPHQ15003 741 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 PPP4R3BQ5MIZ7 849 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 PDXDC2PQ6P474 469 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 SMARCE1Q969G3 411 aa7.06□□□□□ -1.28
CLK1-210ENST00000473565 ZFP91Q96JP5 570 aaPredicted RBP7.06□□□□□ -1.28
CLK1-210ENST00000473565 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.06□□□□□ -1.28
CLK1-210ENST00000473565 POTEMA6NI47 508 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 MEIS2O14770 477 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 OPLAHO14841 1288 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 DDNO94850 711 aaPredicted RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 RPS12P25398 132 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 CLK2P49760 499 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 STAT2P52630 851 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 HIRAP54198 1017 aaPredicted RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 FMR1Q06787 632 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLK1-210ENST00000473565 DHX8Q14562 1220 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 NAALADL2Q58DX5 795 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 ARL6IP4Q66PJ3 421 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 KLHL10Q6JEL2 608 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 DRC7Q8IY82 874 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 C17orf53Q8N3J3 647 aaPredicted RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 ZKSCAN4Q969J2 545 aaPredicted RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 AMNQ9BXJ7 453 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 NAT10Q9H0A0 1025 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 VCPKMTQ9H867 229 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 hCG_1984214I3L0E3 225 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 TBC1D12O60347 775 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 LONP1P36776 959 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 UBA7P41226 1012 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 STAT6P42226 847 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 SLC30A10Q6XR72 485 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 SH3RF1Q7Z6J0 888 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 PLA2G4DQ86XP0 818 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 ZNF713Q8N859 430 aaPredicted RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 DPF2Q92785 391 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 MED15Q96RN5 788 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 NUDT12Q9BQG2 462 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 HSD3B7Q9H2F3 369 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 GOPCQ9HD26 462 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 GGA3Q9NZ52 723 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 CCDC39Q9UFE4 941 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 ASNSP08243 561 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 CD44P16070 742 aaKnown RBP7.05□□□□□ -1.28
CLK1-210ENST00000473565 YBX3P16989 372 aaKnown RBP eCLIP7.05□□□□□ -1.28
CLK1-210ENST00000473565 PTGS1P23219 599 aa7.05□□□□□ -1.28
CLK1-210ENST00000473565 SARSP49591 514 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms