RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 HOXC6P09630 235 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 XRCC5P13010 732 aaKnown RBP23.13■■□□□ 1.29
SF1-213ENST00000472725 IFNAR1P17181 557 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 RGS2P41220 211 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 MCM2P49736 904 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 FBXO46Q6PJ61 603 aaPredicted RBP23.13■■□□□ 1.29
SF1-213ENST00000472725 TRMT44Q8IYL2 757 aaKnown RBP23.13■■□□□ 1.29
SF1-213ENST00000472725 RGS22Q8NE09 1264 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 USP6NLQ92738 828 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 ZSCAN31Q96LW9 406 aaPredicted RBP23.13■■□□□ 1.29
SF1-213ENST00000472725 MMP19Q99542 508 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 PTPN22Q9Y2R2 807 aa23.13■■□□□ 1.29
SF1-213ENST00000472725 PFASO15067 1338 aa23.12■■□□□ 1.29
SF1-213ENST00000472725 hCG_1984214I3L0E3 225 aa23.12■■□□□ 1.29
SF1-213ENST00000472725 FLT3LGP49771 235 aa23.12■■□□□ 1.29
SF1-213ENST00000472725 PRKCZQ05513 592 aa23.12■■□□□ 1.29
SF1-213ENST00000472725 MAP2K5Q13163 448 aa23.12■■□□□ 1.29
SF1-213ENST00000472725 NTRK3Q16288 839 aa23.12■■□□□ 1.29
SF1-213ENST00000472725 HOMER1Q86YM7 354 aa23.12■■□□□ 1.29
SF1-213ENST00000472725 ZNF713Q8N859 430 aaPredicted RBP23.12■■□□□ 1.29
SF1-213ENST00000472725 DIS3Q9Y2L1 958 aaKnown RBP23.12■■□□□ 1.29
SF1-213ENST00000472725 SMCHD1A6NHR9 2005 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 CPLX1O14810 134 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 CDKL5O76039 1030 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 SLC4A3P48751 1232 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 CCT2P78371 535 aaKnown RBP23.11■■□□□ 1.29
SF1-213ENST00000472725 MCF2L2Q86YR7 1114 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 TEX2Q8IWB9 1127 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 PXYLP1Q8TE99 480 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 RNF26Q9BY78 433 aaPredicted RBP23.11■■□□□ 1.29
SF1-213ENST00000472725 SH2B1Q9NRF2 756 aaPredicted RBP23.11■■□□□ 1.29
SF1-213ENST00000472725 MAP3K20Q9NYL2 800 aaKnown RBP23.11■■□□□ 1.29
SF1-213ENST00000472725 PCDHA1Q9Y5I3 950 aa23.11■■□□□ 1.29
SF1-213ENST00000472725 PRPF3O43395 683 aaKnown RBP23.1■■□□□ 1.29
SF1-213ENST00000472725 ADORA2AP29274 412 aa23.1■■□□□ 1.29
SF1-213ENST00000472725 CMTR1Q8N1G2 835 aaKnown RBP23.1■■□□□ 1.29
SF1-213ENST00000472725 ANKRD35Q8N283 1001 aa23.1■■□□□ 1.29
SF1-213ENST00000472725 RAET1EQ8TD07 263 aa23.1■■□□□ 1.29
SF1-213ENST00000472725 DDX11Q96FC9 970 aa23.1■■□□□ 1.29
SF1-213ENST00000472725 APBA2Q99767 749 aa23.1■■□□□ 1.29
SF1-213ENST00000472725 LARP6Q9BRS8 491 aaKnown RBP23.1■■□□□ 1.29
SF1-213ENST00000472725 HOMER2Q9NSB8 354 aa23.1■■□□□ 1.29
SF1-213ENST00000472725 GABRQQ9UN88 632 aa23.1■■□□□ 1.29
SF1-213ENST00000472725 PPP1R11O60927 126 aaPredicted RBP23.09■■□□□ 1.29
SF1-213ENST00000472725 ECM2O94769 699 aaPredicted RBP23.09■■□□□ 1.29
SF1-213ENST00000472725 AKAP17AQ02040 695 aaKnown RBP23.09■■□□□ 1.29
SF1-213ENST00000472725 SCRN1Q12765 414 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 ME3Q16798 604 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 USH1GQ495M9 461 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 DPP9Q86TI2 863 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 TRIM22Q8IYM9 498 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 CCDC82Q8N4S0 544 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 SLAIN1Q8ND83 568 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 CLEC4DQ8WXI8 215 aa23.09■■□□□ 1.29
SF1-213ENST00000472725 V9GY48 417 aaPredicted RBP23.09■■□□□ 1.29
SF1-213ENST00000472725 DNAJC25-GNG10A0A024R161 153 aa23.08■■□□□ 1.29
SF1-213ENST00000472725 GHRHRQ02643 423 aa23.08■■□□□ 1.29
SF1-213ENST00000472725 STK3Q13188 491 aa23.08■■□□□ 1.29
SF1-213ENST00000472725 MUM1L1Q5H9M0 696 aa23.08■■□□□ 1.29
SF1-213ENST00000472725 GTF3C6Q969F1 213 aa23.08■■□□□ 1.29
SF1-213ENST00000472725 NCOA5Q9HCD5 579 aaKnown RBP23.08■■□□□ 1.29
SF1-213ENST00000472725 A1CFQ9NQ94 594 aaKnown RBP23.08■■□□□ 1.29
SF1-213ENST00000472725 RBBP6Q7Z6E9 1792 aaKnown RBP23.08■■□□□ 1.29
SF1-213ENST00000472725 PLXNA1Q9UIW2 1896 aa23.07■■□□□ 1.28
SF1-213ENST00000472725 FAM177A1Q8N128 213 aaPredicted RBP23.07■■□□□ 1.28
SF1-213ENST00000472725 MSL3Q8N5Y2 521 aaKnown RBP23.07■■□□□ 1.28
SF1-213ENST00000472725 CYP39A1Q9NYL5 469 aa23.07■■□□□ 1.28
SF1-213ENST00000472725 LOC102724159A0A0B4J2E5 919 aa23.06■■□□□ 1.28
SF1-213ENST00000472725 NFIBO00712 420 aa23.06■■□□□ 1.28
SF1-213ENST00000472725 SSRP1Q08945 709 aaKnown RBP23.06■■□□□ 1.28
SF1-213ENST00000472725 PWP2Q15269 919 aaKnown RBP23.06■■□□□ 1.28
SF1-213ENST00000472725 PFKFB3Q16875 520 aaPredicted RBP23.06■■□□□ 1.28
SF1-213ENST00000472725 ZNF792Q3KQV3 632 aa23.06■■□□□ 1.28
SF1-213ENST00000472725 OLFML2BQ68BL8 750 aa23.06■■□□□ 1.28
SF1-213ENST00000472725 PPP1R18Q6NYC8 613 aa23.06■■□□□ 1.28
SF1-213ENST00000472725 RNF207Q6ZRF8 634 aa23.06■■□□□ 1.28
SF1-213ENST00000472725 ZNF467Q7Z7K2 595 aaPredicted RBP23.06■■□□□ 1.28
SF1-213ENST00000472725 PTCH2Q9Y6C5 1203 aa23.06■■□□□ 1.28
SF1-213ENST00000472725 POTEB2H3BUK9 544 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 ADCY3O60266 1144 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 COBLO75128 1261 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 SCG2P13521 617 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 CYP2B6P20813 491 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 NSMFQ6X4W1 530 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 NOL8Q76FK4 1167 aaKnown RBP23.05■■□□□ 1.28
SF1-213ENST00000472725 PIBF1Q8WXW3 757 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 GLT8D2Q9H1C3 349 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 STK36Q9NRP7 1315 aa23.05■■□□□ 1.28
SF1-213ENST00000472725 DEXIO95424 95 aa23.04■■□□□ 1.28
SF1-213ENST00000472725 GRK4P32298 578 aa23.04■■□□□ 1.28
SF1-213ENST00000472725 FAM133AQ8N9E0 248 aa23.04■■□□□ 1.28
SF1-213ENST00000472725 CCDC12Q8WUD4 166 aaPredicted RBP23.04■■□□□ 1.28
SF1-213ENST00000472725 LLPHQ9BRT6 129 aaKnown RBP23.04■■□□□ 1.28
SF1-213ENST00000472725 SLC26A6Q9BXS9 759 aa23.04■■□□□ 1.28
SF1-213ENST00000472725 MCOLN1Q9GZU1 580 aa23.04■■□□□ 1.28
SF1-213ENST00000472725 BARHL2Q9NY43 387 aa23.04■■□□□ 1.28
SF1-213ENST00000472725 ADD3Q9UEY8 706 aaKnown RBP23.04■■□□□ 1.28
SF1-213ENST00000472725 PTPDC1A2A3K4 754 aa23.03■■□□□ 1.28
SF1-213ENST00000472725 LARGE1O95461 756 aa23.03■■□□□ 1.28
SF1-213ENST00000472725 HSD17B4P51659 736 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms