RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 TRIM32Q13049 653 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 SART3Q15020 963 aaKnown RBP8.97□□□□□ -0.97
TRIM59-204ENST00000471396 NECTIN1Q15223 517 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 TKFCQ3LXA3 575 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 ASPRV1Q53RT3 343 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 MAP3K21Q5TCX8 1036 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 MFSD14CQ5VZR4 134 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 OLFML2BQ68BL8 750 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 CREB3L3Q68CJ9 461 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 CHST13Q8NET6 341 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 NPLOC4Q8TAT6 608 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 SHISA4Q96DD7 197 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 RANBP17Q9H2T7 1088 aaKnown RBP8.97□□□□□ -0.97
TRIM59-204ENST00000471396 HMX1Q9NP08 348 aaPredicted RBP8.97□□□□□ -0.97
TRIM59-204ENST00000471396 GPCPD1Q9NPB8 672 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 RNF146Q9NTX7 359 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 FLRT1Q9NZU1 646 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 FBXO40Q9UH90 709 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 RIPK3Q9Y572 518 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 PLXNA1Q9UIW2 1896 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 ZNF536O15090 1300 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 RPTORQ8N122 1335 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 SMCHD1A6NHR9 2005 aa8.97□□□□□ -0.97
TRIM59-204ENST00000471396 BAZ2BQ9UIF8 2168 aaKnown RBP8.96□□□□□ -0.97
TRIM59-204ENST00000471396 IFIT3O14879 490 aaKnown RBP8.96□□□□□ -0.98
TRIM59-204ENST00000471396 IGHA2P01877 340 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 ICAM1P05362 532 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 PARP1P09874 1014 aaKnown RBP8.96□□□□□ -0.98
TRIM59-204ENST00000471396 GOLGA8HP0CJ92 632 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 CAPN2P17655 700 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 ANTXR2P58335 489 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 SNAP25P60880 206 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 WTAPQ15007 396 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 CCDC174Q6PII3 467 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 U2AF1L4Q8WU68 220 aaKnown RBP8.96□□□□□ -0.98
TRIM59-204ENST00000471396 DEFB118Q96PH6 123 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 ACAD9Q9H845 621 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 HOMER2Q9NSB8 354 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 PNMA2Q9UL42 364 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 CCPG1Q9ULG6 757 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 DIS3Q9Y2L1 958 aaKnown RBP8.96□□□□□ -0.98
TRIM59-204ENST00000471396 WDR19Q8NEZ3 1342 aa8.96□□□□□ -0.98
TRIM59-204ENST00000471396 DNAJC25-GNG10A0A024R161 153 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 TULP1O00294 542 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-204ENST00000471396 PRC1O43663 620 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 REC8O95072 547 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 SGPL1O95470 568 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 PGK2P07205 417 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 ALAS1P13196 640 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 CYP2C19P33261 490 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 MCM5P33992 734 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 CACNB2Q08289 660 aaPredicted RBP8.95□□□□□ -0.98
TRIM59-204ENST00000471396 ZNF792Q3KQV3 632 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 TMEM67Q5HYA8 995 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 CHST3Q7LGC8 479 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 OXER1Q8TDS5 423 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 DDX11Q96FC9 970 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 MAML3Q96JK9 1138 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 AGBL1Q96MI9 1066 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 MTA3Q9BTC8 594 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 MYH6P13533 1939 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 MCM3APO60318 1980 aa8.95□□□□□ -0.98
TRIM59-204ENST00000471396 FRMPD3Q5JV73 1810 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 SH2B2O14492 632 aaPredicted RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 FARP2O94887 1054 aaPredicted RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 CYBAP13498 195 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 TAL1P17542 331 aaPredicted RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 CCND3P30281 292 aaPredicted RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 MLLT3P42568 568 aaPredicted RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 GRM4Q14833 912 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 CDC37Q16543 378 aaPredicted RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 ANKRD35Q8N283 1001 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 MSL3Q8N5Y2 521 aaKnown RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 IGDCC4Q8TDY8 1250 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 TMEM87BQ96K49 555 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 TRERF1Q96PN7 1200 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 UBA5Q9GZZ9 404 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 CPVLQ9H3G5 476 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 LY9Q9HBG7 655 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 A1CFQ9NQ94 594 aaKnown RBP8.94□□□□□ -0.98
TRIM59-204ENST00000471396 NRBP1Q9UHY1 535 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 PFASO15067 1338 aa8.94□□□□□ -0.98
TRIM59-204ENST00000471396 EPB41L2O43491 1005 aaKnown RBP8.93□□□□□ -0.98
TRIM59-204ENST00000471396 DHX16O60231 1041 aaKnown RBP8.93□□□□□ -0.98
TRIM59-204ENST00000471396 MSCO60682 206 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 DDAH1O94760 285 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 TFRCP02786 760 aaKnown RBP8.93□□□□□ -0.98
TRIM59-204ENST00000471396 HSPA4P34932 840 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 TROAPQ12815 778 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 COL9A3Q14050 684 aaPredicted RBP8.93□□□□□ -0.98
TRIM59-204ENST00000471396 KRT32Q14532 448 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 MUM1L1Q5H9M0 696 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 UBE2Q1Q7Z7E8 422 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 CATIPQ7Z7H3 387 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 ADGRF4Q8IZF3 695 aa8.93□□□□□ -0.98
TRIM59-204ENST00000471396 ZNF654Q8IZM8 581 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms