RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 CCDC85CA6NKD9 419 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 GOLGA8AA7E2F4 631 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 GOLGA8BA8MQT2 603 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 NFIBO00712 420 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 ZBTB43O43298 467 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 RCAN1P53805 252 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 UBXN2AP68543 259 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 APOBRQ0VD83 1088 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 TOB2Q14106 344 aaPredicted RBP14.41□□□□□ -0.1
SCNM1-205ENST00000471039 MTFR1Q15390 333 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 TMTC3Q6ZXV5 915 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 HOMER1Q86YM7 354 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 MAML3Q96JK9 1138 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 BIN2Q9UBW5 565 aaPredicted RBP14.41□□□□□ -0.1
SCNM1-205ENST00000471039 ABCB11O95342 1321 aa14.41□□□□□ -0.1
SCNM1-205ENST00000471039 ZBTB5O15062 677 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 PPP1R11O60927 126 aaPredicted RBP14.4□□□□□ -0.1
SCNM1-205ENST00000471039 MYCP01106 439 aaPredicted RBP14.4□□□□□ -0.1
SCNM1-205ENST00000471039 IGHA2P01877 340 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
SCNM1-205ENST00000471039 GNAQP50148 359 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 RTN1Q16799 776 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 ZNF792Q3KQV3 632 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 MAP3K21Q5TCX8 1036 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 OLFML2BQ68BL8 750 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 FBXO11Q86XK2 927 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 ANKRD35Q8N283 1001 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 FANCBQ8NB91 859 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 CLEC4DQ8WXI8 215 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 FGD4Q96M96 766 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 PIGSQ96S52 555 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 VAT1LQ9HCJ6 419 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 RBM28Q9NW13 759 aaKnown RBP14.4□□□□□ -0.1
SCNM1-205ENST00000471039 SLC5A4Q9NY91 659 aa14.4□□□□□ -0.1
SCNM1-205ENST00000471039 CCL5P13501 91 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 SOX10P56693 466 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 SLC30A10Q6XR72 485 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 CMTR1Q8N1G2 835 aaKnown RBP14.39□□□□□ -0.11
SCNM1-205ENST00000471039 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
SCNM1-205ENST00000471039 FAM133AQ8N9E0 248 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 DDX11Q96FC9 970 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 AMNQ9BXJ7 453 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 UNC93B1Q9H1C4 597 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 CYP39A1Q9NYL5 469 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 NAP1L2Q9ULW6 460 aaPredicted RBP14.39□□□□□ -0.11
SCNM1-205ENST00000471039 DIS3Q9Y2L1 958 aaKnown RBP14.39□□□□□ -0.11
SCNM1-205ENST00000471039 ASTN1O14525 1302 aa14.39□□□□□ -0.11
SCNM1-205ENST00000471039 CAPN15O75808 1086 aa14.38□□□□□ -0.11
SCNM1-205ENST00000471039 SMARCA1P28370 1054 aa14.38□□□□□ -0.11
SCNM1-205ENST00000471039 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCNM1-205ENST00000471039 EVCP57679 992 aa14.38□□□□□ -0.11
SCNM1-205ENST00000471039 CACNB2Q08289 660 aaPredicted RBP14.38□□□□□ -0.11
SCNM1-205ENST00000471039 ZNF467Q7Z7K2 595 aaPredicted RBP14.38□□□□□ -0.11
SCNM1-205ENST00000471039 LZTS2Q9BRK4 669 aa14.38□□□□□ -0.11
SCNM1-205ENST00000471039 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.38□□□□□ -0.11
SCNM1-205ENST00000471039 PAK6Q9NQU5 681 aaPredicted RBP14.38□□□□□ -0.11
SCNM1-205ENST00000471039 ALPK3Q96L96 1907 aa14.38□□□□□ -0.11
SCNM1-205ENST00000471039 MKI67P46013 3256 aaKnown RBP14.38□□□□□ -0.11
SCNM1-205ENST00000471039 PNMA6FA0A0J9YX94 578 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 POTEFA5A3E0 1075 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 OPLAHO14841 1288 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 CYBAP13498 195 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 CDC27P30260 824 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 CYP2C19P33261 490 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 CNTN2Q02246 1040 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 PIBF1Q8WXW3 757 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
SCNM1-205ENST00000471039 FAM217BQ9NTX9 383 aaPredicted RBP14.37□□□□□ -0.11
SCNM1-205ENST00000471039 PDRG1Q9NUG6 133 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 SEC63Q9UGP8 760 aaKnown RBP14.37□□□□□ -0.11
SCNM1-205ENST00000471039 RPTORQ8N122 1335 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 SYNGAP1Q96PV0 1343 aa14.37□□□□□ -0.11
SCNM1-205ENST00000471039 KIAA0100Q14667 2235 aaKnown RBP14.36□□□□□ -0.11
SCNM1-205ENST00000471039 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
SCNM1-205ENST00000471039 FUT2Q10981 343 aa14.36□□□□□ -0.11
SCNM1-205ENST00000471039 BAATQ14032 418 aaPredicted RBP14.36□□□□□ -0.11
SCNM1-205ENST00000471039 RNF207Q6ZRF8 634 aa14.36□□□□□ -0.11
SCNM1-205ENST00000471039 MSL3Q8N5Y2 521 aaKnown RBP14.36□□□□□ -0.11
SCNM1-205ENST00000471039 SHISA4Q96DD7 197 aa14.36□□□□□ -0.11
SCNM1-205ENST00000471039 TINF2Q9BSI4 451 aa14.36□□□□□ -0.11
SCNM1-205ENST00000471039 RNF208Q9H0X6 261 aa14.36□□□□□ -0.11
SCNM1-205ENST00000471039 HMX1Q9NP08 348 aaPredicted RBP14.36□□□□□ -0.11
SCNM1-205ENST00000471039 MRPL11Q9Y3B7 192 aaKnown RBP14.36□□□□□ -0.11
SCNM1-205ENST00000471039 PCDHA1Q9Y5I3 950 aa14.36□□□□□ -0.11
SCNM1-205ENST00000471039 SOWAHBA6NEL2 793 aa14.35□□□□□ -0.11
SCNM1-205ENST00000471039 PDIA3P30101 505 aaKnown RBP14.35□□□□□ -0.11
SCNM1-205ENST00000471039 CCND3P30281 292 aaPredicted RBP14.35□□□□□ -0.11
SCNM1-205ENST00000471039 RBM25P49756 843 aaKnown RBP14.35□□□□□ -0.11
SCNM1-205ENST00000471039 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
SCNM1-205ENST00000471039 GHRHRQ02643 423 aa14.35□□□□□ -0.11
SCNM1-205ENST00000471039 PPP2R5BQ15173 497 aa14.35□□□□□ -0.11
SCNM1-205ENST00000471039 MAMDC4Q6UXC1 1216 aa14.35□□□□□ -0.11
SCNM1-205ENST00000471039 CCDC82Q8N4S0 544 aa14.35□□□□□ -0.11
SCNM1-205ENST00000471039 TRPV1Q8NER1 839 aa14.35□□□□□ -0.11
SCNM1-205ENST00000471039 PURBQ96QR8 312 aaKnown RBP14.35□□□□□ -0.11
SCNM1-205ENST00000471039 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms