RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
MRPL28-208ENST00000469744 CCPG1Q9ULG6 757 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 CNPY2Q9Y2B0 182 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 SNAI1O95863 264 aaPredicted RBP20.5■□□□□ 0.87
MRPL28-208ENST00000469744 ATN1P54259 1190 aaPredicted RBP20.5■□□□□ 0.87
MRPL28-208ENST00000469744 ZNF543Q08ER8 600 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 NECTIN1Q15223 517 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 IQCA1Q86XH1 822 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 ZSWIM5Q9P217 1185 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 NRBP1Q9UHY1 535 aa20.5■□□□□ 0.87
MRPL28-208ENST00000469744 GOLGA8HP0CJ92 632 aa20.49■□□□□ 0.87
MRPL28-208ENST00000469744 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
MRPL28-208ENST00000469744 ARRDC4Q8NCT1 418 aa20.49■□□□□ 0.87
MRPL28-208ENST00000469744 RANBP17Q9H2T7 1088 aaKnown RBP20.49■□□□□ 0.87
MRPL28-208ENST00000469744 CPVLQ9H3G5 476 aa20.49■□□□□ 0.87
MRPL28-208ENST00000469744 ZHX1Q9UKY1 873 aaPredicted RBP20.49■□□□□ 0.87
MRPL28-208ENST00000469744 LCTP09848 1927 aa20.49■□□□□ 0.87
MRPL28-208ENST00000469744 SYNGAP1Q96PV0 1343 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 KBTBD13C9JR72 458 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 PGK1P00558 417 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 ICAM1P05362 532 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 RARBP10826 455 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 LRRC41Q15345 812 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 TKFCQ3LXA3 575 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 MAMDC4Q6UXC1 1216 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 ENAHQ8N8S7 591 aaPredicted RBP20.48■□□□□ 0.87
MRPL28-208ENST00000469744 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
MRPL28-208ENST00000469744 XPNPEP3Q9NQH7 507 aa20.48■□□□□ 0.87
MRPL28-208ENST00000469744 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.48■□□□□ 0.87
MRPL28-208ENST00000469744 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
MRPL28-208ENST00000469744 TNKSO95271 1327 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 POTEB2H3BUK9 544 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 SNHG28P0DPA3 235 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 SKOR2Q2VWA4 1001 aaPredicted RBP20.47■□□□□ 0.87
MRPL28-208ENST00000469744 ARMCX2Q7L311 632 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 ZNF467Q7Z7K2 595 aaPredicted RBP20.47■□□□□ 0.87
MRPL28-208ENST00000469744 DGKHQ86XP1 1220 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 MSL3Q8N5Y2 521 aaKnown RBP20.47■□□□□ 0.87
MRPL28-208ENST00000469744 FAM133AQ8N9E0 248 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 KRT23Q9C075 422 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 KAT14Q9H8E8 782 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 TAF6LQ9Y6J9 622 aa20.47■□□□□ 0.87
MRPL28-208ENST00000469744 AKR1A1P14550 325 aa20.46■□□□□ 0.87
MRPL28-208ENST00000469744 RNF20Q5VTR2 975 aa20.46■□□□□ 0.87
MRPL28-208ENST00000469744 NSMFQ6X4W1 530 aa20.46■□□□□ 0.87
MRPL28-208ENST00000469744 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
MRPL28-208ENST00000469744 RASEFQ8IZ41 740 aa20.46■□□□□ 0.87
MRPL28-208ENST00000469744 FERMT2Q96AC1 680 aa20.46■□□□□ 0.87
MRPL28-208ENST00000469744 PURBQ96QR8 312 aaKnown RBP20.46■□□□□ 0.87
MRPL28-208ENST00000469744 CNNM2Q9H8M5 875 aa20.46■□□□□ 0.87
MRPL28-208ENST00000469744 ASTN1O14525 1302 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 SOWAHBA6NEL2 793 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 CYP21A2P08686 494 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 ADCYAP1R1P41586 468 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 ACVR2BQ13705 512 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 TSGA10IPQ3SY00 556 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 CYB5R4Q7L1T6 521 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 UBAC1Q9BSL1 405 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 UBA5Q9GZZ9 404 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 PRO3102Q9H379 93 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 ZSWIM6Q9HCJ5 1215 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 CYP39A1Q9NYL5 469 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 RBM8AQ9Y5S9 174 aaKnown RBP20.45■□□□□ 0.86
MRPL28-208ENST00000469744 LRRC37A2A6NM11 1700 aa20.45■□□□□ 0.86
MRPL28-208ENST00000469744 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
MRPL28-208ENST00000469744 NFIBO00712 420 aa20.44■□□□□ 0.86
MRPL28-208ENST00000469744 ADCY6O43306 1168 aa20.44■□□□□ 0.86
MRPL28-208ENST00000469744 TRAK2O60296 914 aa20.44■□□□□ 0.86
MRPL28-208ENST00000469744 FXR1P51114 621 aaKnown RBP eCLIP20.44■□□□□ 0.86
MRPL28-208ENST00000469744 CCDC178Q5BJE1 867 aa20.44■□□□□ 0.86
MRPL28-208ENST00000469744 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
MRPL28-208ENST00000469744 PSMA5P28066 241 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 IRX5P78411 483 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-208ENST00000469744 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 ALDH8A1Q9H2A2 487 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-208ENST00000469744 FAM184BQ9ULE4 1060 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 U3KPZ7 1027 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-208ENST00000469744 SYNRGQ9UMZ2 1314 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 NT5C2P49902 561 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 RTP1P59025 263 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 CCDC144BQ3MJ40 725 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 GPATCH4Q5T3I0 446 aaKnown RBP20.43■□□□□ 0.86
MRPL28-208ENST00000469744 ZSCAN31Q96LW9 406 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-208ENST00000469744 ABHD16BQ9H3Z7 469 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 LIMCH1Q9UPQ0 1083 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 ATP11BQ9Y2G3 1177 aa20.43■□□□□ 0.86
MRPL28-208ENST00000469744 MYH6P13533 1939 aa20.42■□□□□ 0.86
MRPL28-208ENST00000469744 LAMA3Q16787 3333 aa20.42■□□□□ 0.86
MRPL28-208ENST00000469744 ADAMTS4O75173 837 aa20.42■□□□□ 0.86
MRPL28-208ENST00000469744 BAG4O95429 457 aaKnown RBP20.42■□□□□ 0.86
MRPL28-208ENST00000469744 MAGEA10P43363 369 aaPredicted RBP20.42■□□□□ 0.86
MRPL28-208ENST00000469744 BAATQ14032 418 aaPredicted RBP20.42■□□□□ 0.86
MRPL28-208ENST00000469744 USH1GQ495M9 461 aa20.42■□□□□ 0.86
MRPL28-208ENST00000469744 IFIT1BQ5T764 474 aaKnown RBP20.42■□□□□ 0.86
MRPL28-208ENST00000469744 SLC39A5Q6ZMH5 540 aa20.42■□□□□ 0.86
MRPL28-208ENST00000469744 RNF180Q86T96 592 aa20.42■□□□□ 0.86
MRPL28-208ENST00000469744 KATNBL1Q9H079 304 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms