RNA–Protein interactions for RNA: ENST00000468275.5

APTX-215, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,455 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-215ENST00000468275 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
APTX-215ENST00000468275 ZFYVE28Q9HCC9 887 aa13.78□□□□□ -0.2
APTX-215ENST00000468275 CLIP2Q9UDT6 1046 aa13.78□□□□□ -0.2
APTX-215ENST00000468275 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
APTX-215ENST00000468275 CCL15-CCL14A0A0B4J2E2 113 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 TRIM75PA6NK02 468 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 SCG2P13521 617 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 CALML3P27482 149 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 KCNJ6P48051 423 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 PLCB2Q00722 1185 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 NR5A1Q13285 461 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 GRM4Q14833 912 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 CCL15Q16663 113 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 DCAF15Q66K64 600 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.77□□□□□ -0.21
APTX-215ENST00000468275 CCDC186Q7Z3E2 898 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 DAGLBQ8NCG7 672 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 SH3TC2Q8TF17 1288 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 PYM1Q9BRP8 204 aaKnown RBP13.77□□□□□ -0.21
APTX-215ENST00000468275 DDX4Q9NQI0 724 aaKnown RBP13.77□□□□□ -0.21
APTX-215ENST00000468275 MCM9Q9NXL9 1143 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 MYH8P13535 1937 aa13.77□□□□□ -0.21
APTX-215ENST00000468275 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.21
APTX-215ENST00000468275 TSPY2A6NKD2 308 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 PRDM1O75626 825 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 PTGS1P23219 599 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 PICALMQ13492 652 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 VGLL4Q14135 290 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 CHRDL2Q6WN34 429 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 SRBD1Q8N5C6 995 aaKnown RBP13.76□□□□□ -0.21
APTX-215ENST00000468275 AOPEPQ8N6M6 819 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 OXER1Q8TDS5 423 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 SH3RF3Q8TEJ3 882 aaPredicted RBP13.76□□□□□ -0.21
APTX-215ENST00000468275 CCDC34Q96HJ3 373 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 V9GY48 417 aaPredicted RBP13.76□□□□□ -0.21
APTX-215ENST00000468275 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
APTX-215ENST00000468275 CYP2D6P10635 497 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.21
APTX-215ENST00000468275 USP5P45974 858 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 GTF2A2P52657 109 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 ATP2C1P98194 919 aaPredicted RBP13.75□□□□□ -0.21
APTX-215ENST00000468275 LONRF3Q496Y0 759 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 C16orf86Q6ZW13 317 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 ZFPM1Q8IX07 1006 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 CNNM3Q8NE01 707 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 ZNF830Q96NB3 372 aaPredicted RBP13.75□□□□□ -0.21
APTX-215ENST00000468275 CLIC6Q96NY7 704 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 ARHGAP39Q9C0H5 1083 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 VPS54Q9P1Q0 977 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 PYCARDQ9ULZ3 195 aa13.75□□□□□ -0.21
APTX-215ENST00000468275 ACTN4O43707 911 aaKnown RBP13.74□□□□□ -0.21
APTX-215ENST00000468275 MYL5Q02045 173 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 ARL6IP4Q66PJ3 421 aaKnown RBP13.74□□□□□ -0.21
APTX-215ENST00000468275 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 LRRC8AQ8IWT6 810 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
APTX-215ENST00000468275 MLKLQ8NB16 471 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.74□□□□□ -0.21
APTX-215ENST00000468275 HSD3B7Q9H2F3 369 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 KAT14Q9H8E8 782 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 CABP5Q9NP86 173 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 COL2A1P02458 1487 aaPredicted RBP13.74□□□□□ -0.21
APTX-215ENST00000468275 ATRNL1Q5VV63 1379 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 M0R2N6 131 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 RASA1P20936 1047 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 TFAP4Q01664 338 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 SEMA3FQ13275 785 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 POSTNQ15063 836 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 MIGA2Q7L4E1 593 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 SH3BP5LQ7L8J4 393 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 FOXP4Q8IVH2 680 aaPredicted RBP13.74□□□□□ -0.21
APTX-215ENST00000468275 CMTR1Q8N1G2 835 aaKnown RBP13.74□□□□□ -0.21
APTX-215ENST00000468275 PNMA1Q8ND90 353 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 WRNIP1Q96S55 665 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 SPZ1Q9BXG8 430 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 ZNF341Q9BYN7 854 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 PCDHA5Q9Y5H7 936 aa13.74□□□□□ -0.21
APTX-215ENST00000468275 PALM3A6NDB9 673 aaPredicted RBP13.73□□□□□ -0.21
APTX-215ENST00000468275 DDTLA6NHG4 134 aaPredicted RBP13.73□□□□□ -0.21
APTX-215ENST00000468275 DYNC1I1O14576 645 aa13.73□□□□□ -0.21
APTX-215ENST00000468275 TLR2O60603 784 aa13.73□□□□□ -0.21
APTX-215ENST00000468275 LACTBP83111 547 aaPredicted RBP13.73□□□□□ -0.21
APTX-215ENST00000468275 MORC3Q14149 939 aa13.73□□□□□ -0.21
APTX-215ENST00000468275 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
APTX-215ENST00000468275 CCDC150Q8NCX0 1101 aa13.73□□□□□ -0.21
APTX-215ENST00000468275 CCDC148Q8NFR7 591 aa13.73□□□□□ -0.21
APTX-215ENST00000468275 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
APTX-215ENST00000468275 CACTINQ8WUQ7 758 aaKnown RBP13.73□□□□□ -0.21
APTX-215ENST00000468275 CSADQ9Y600 493 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms