RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 TINF2Q9BSI4 451 aa17.23■□□□□ 0.35
PCOLCE-204ENST00000468214 ACAD9Q9H845 621 aa17.23■□□□□ 0.35
PCOLCE-204ENST00000468214 GPCPD1Q9NPB8 672 aa17.23■□□□□ 0.35
PCOLCE-204ENST00000468214 FRMPD3Q5JV73 1810 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 SEPT4O43236 478 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 DDAH1O94760 285 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 PARP1P09874 1014 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 ALAS1P13196 640 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 SLC16A2P36021 539 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 ASPRV1Q53RT3 343 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 GPATCH4Q5T3I0 446 aaKnown RBP17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 SGMS1Q86VZ5 419 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 AGBL1Q96MI9 1066 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 MYL10Q9BUA6 226 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 RNF146Q9NTX7 359 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 CNPY2Q9Y2B0 182 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 SLC12A7Q9Y666 1083 aa17.22■□□□□ 0.35
PCOLCE-204ENST00000468214 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 RBM25P49756 843 aaKnown RBP17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 MNX1P50219 401 aaPredicted RBP17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 TROAPQ12815 778 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 GRM4Q14833 912 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 SYDE2Q5VT97 1194 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 ANO1Q5XXA6 986 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 BRF1Q92994 677 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 NRBP1Q9UHY1 535 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 CCPG1Q9ULG6 757 aa17.21■□□□□ 0.35
PCOLCE-204ENST00000468214 ZNF536O15090 1300 aa17.21■□□□□ 0.34
PCOLCE-204ENST00000468214 KLF18A0A0U1RQI7 1052 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 APOA5Q6Q788 366 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 BTNL9Q6UXG8 535 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 MICU3Q86XE3 530 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 TRERF1Q96PN7 1200 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 PDRG1Q9NUG6 133 aa17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
PCOLCE-204ENST00000468214 DNAJC25-GNG10A0A024R161 153 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 POTEB2H3BUK9 544 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 CALM1P0DP23 149 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 CALM2P0DP24 149 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 CALM3P0DP25 149 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 RXRAP19793 462 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 RAB11FIP4Q86YS3 637 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 C7orf61Q8IZ16 206 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 TBC1D32Q96NH3 1257 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 RANBP17Q9H2T7 1088 aaKnown RBP17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 MAD2L2Q9UI95 211 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 ALPK3Q96L96 1907 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 PFASO15067 1338 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
PCOLCE-204ENST00000468214 KBTBD13C9JR72 458 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 DNM1LO00429 736 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 ZBTB43O43298 467 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 ICAM1P05362 532 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 RARBP10826 455 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 KIF5BP33176 963 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 TOB2Q14106 344 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 GJC2Q5T442 439 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 ZNF467Q7Z7K2 595 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 CCDC144CPQ8IYA2 1237 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 STAG2Q8N3U4 1231 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 MAP3K14Q99558 947 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 CPVLQ9H3G5 476 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 ZHX1Q9UKY1 873 aaPredicted RBP17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 TRIOBPQ9H2D6 2365 aa17.18■□□□□ 0.34
PCOLCE-204ENST00000468214 LCTP09848 1927 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 MCM3APO60318 1980 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 GOLGA8BA8MQT2 603 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 KLRF2D3W0D1 207 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 COL6A1P12109 1028 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 AKR1A1P14550 325 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 TAL1P17542 331 aaPredicted RBP17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 NEK4P51957 841 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 MAMDC4Q6UXC1 1216 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 NSMFQ6X4W1 530 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 KIF2CQ99661 725 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 SENP6Q9GZR1 1112 aaPredicted RBP17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 A1CFQ9NQ94 594 aaKnown RBP17.17■□□□□ 0.34
PCOLCE-204ENST00000468214 GOLGA8AA7E2F4 631 aa17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 RCAN1P53805 252 aa17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 CNTN2Q02246 1040 aa17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 MUM1L1Q5H9M0 696 aa17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 FANCBQ8NB91 859 aa17.16■□□□□ 0.34
PCOLCE-204ENST00000468214 XPNPEP3Q9NQH7 507 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms