RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 NUCB2P80303 420 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 HTRA3P83110 453 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 KIF23Q02241 960 aaPredicted RBP13.63□□□□□ -0.23
RNF13-208ENST00000467996 TRAF1Q13077 416 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 NPY5RQ15761 445 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 MB21D1Q8N884 522 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 GTF3C2Q8WUA4 911 aaPredicted RBP13.63□□□□□ -0.23
RNF13-208ENST00000467996 PARK7Q99497 189 aaKnown RBP13.63□□□□□ -0.23
RNF13-208ENST00000467996 ZMYND12Q9H0C1 365 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 ZCCHC17Q9NP64 241 aaKnown RBP13.63□□□□□ -0.23
RNF13-208ENST00000467996 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 ZDHHC9Q9Y397 364 aa13.63□□□□□ -0.23
RNF13-208ENST00000467996 ATP2A1O14983 1001 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 PEX10O60683 326 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 AOC2O75106 756 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 CNMDO75829 334 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
RNF13-208ENST00000467996 CALML3P27482 149 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 ADCY7P51828 1080 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 FOXD4L5Q5VV16 416 aaPredicted RBP13.62□□□□□ -0.23
RNF13-208ENST00000467996 SNRNP48Q6IEG0 339 aaKnown RBP13.62□□□□□ -0.23
RNF13-208ENST00000467996 DIS3L2Q8IYB7 885 aaKnown RBP13.62□□□□□ -0.23
RNF13-208ENST00000467996 DAGLBQ8NCG7 672 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
RNF13-208ENST00000467996 FOXD4L4Q8WXT5 416 aaPredicted RBP13.62□□□□□ -0.23
RNF13-208ENST00000467996 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 TEX13BQ9BXU2 312 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 PNMA2Q9UL42 364 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 ADGRA2Q96PE1 1338 aa13.62□□□□□ -0.23
RNF13-208ENST00000467996 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 KIF28PB7ZC32 967 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 OPLAHO14841 1288 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 ADAMTS3O15072 1205 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 F13A1P00488 732 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 ALAS1P13196 640 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 KRT2P35908 639 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 TM4SF4P48230 202 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 PLS1Q14651 629 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 SAFBQ15424 915 aaKnown RBP eCLIP13.61□□□□□ -0.23
RNF13-208ENST00000467996 MCTP1Q6DN14 999 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 GALNT17Q6IS24 598 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 OXER1Q8TDS5 423 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 C6orf50Q9HD87 102 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 RBPJLQ9UBG7 517 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 PCDHA4Q9UN74 947 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
RNF13-208ENST00000467996 RABGAP1Q9Y3P9 1069 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 MGAMO43451 1857 aa13.61□□□□□ -0.23
RNF13-208ENST00000467996 BTBD18B2RXH4 712 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 M0R2N6 131 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 GNA11P29992 359 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 STAT3P40763 770 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 RESTQ13127 1097 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 TAF1CQ15572 869 aaPredicted RBP13.6□□□□□ -0.23
RNF13-208ENST00000467996 MUM1L1Q5H9M0 696 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 FERMT3Q86UX7 667 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 BLIDQ8IZY5 108 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 CLEC4DQ8WXI8 215 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 CUL5Q93034 780 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 SPATC1LQ9H0A9 340 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 BRMS1Q9HCU9 246 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 HOMER2Q9NSB8 354 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 RNF146Q9NTX7 359 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 RIPK3Q9Y572 518 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 TCHHQ07283 1943 aa13.6□□□□□ -0.23
RNF13-208ENST00000467996 ZNFX1Q9P2E3 1918 aaKnown RBP13.59□□□□□ -0.23
RNF13-208ENST00000467996 NFIBO00712 420 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 GCLCP48506 637 aaPredicted RBP13.59□□□□□ -0.23
RNF13-208ENST00000467996 CLK2P49760 499 aaKnown RBP13.59□□□□□ -0.23
RNF13-208ENST00000467996 VEGFBP49765 207 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 ERVK-9P63128 1117 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 ERVK-24P63145 666 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 NR5A1Q13285 461 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 GNL2Q13823 731 aaKnown RBP13.59□□□□□ -0.23
RNF13-208ENST00000467996 UBE2SQ16763 222 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 TKFCQ3LXA3 575 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 REM2Q8IYK8 340 aaPredicted RBP13.59□□□□□ -0.23
RNF13-208ENST00000467996 ANKRD13CQ8N6S4 541 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 BICD2Q8TD16 824 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 RASGRP4Q8TDF6 673 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 TNFRSF25Q93038 417 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 TRERF1Q96PN7 1200 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 GLT8D2Q9H1C3 349 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 FOXP1Q9H334 677 aaPredicted RBP13.59□□□□□ -0.23
RNF13-208ENST00000467996 PSTPIP2Q9H939 334 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 MORF4L1Q9UBU8 362 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 ZNF236Q9UL36 1845 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
RNF13-208ENST00000467996 MEIS2O14770 477 aa13.58□□□□□ -0.24
RNF13-208ENST00000467996 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.24
RNF13-208ENST00000467996 MRPL12P52815 198 aaKnown RBP13.58□□□□□ -0.24
RNF13-208ENST00000467996 Q3C1V9 767 aa13.58□□□□□ -0.24
RNF13-208ENST00000467996 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
RNF13-208ENST00000467996 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.24
RNF13-208ENST00000467996 MOV10L1Q9BXT6 1211 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms