RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 SLC30A10Q6XR72 485 aa13.78□□□□□ -0.2
EDEM3-204ENST00000466392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.78□□□□□ -0.2
EDEM3-204ENST00000466392 FAM133AQ8N9E0 248 aa13.78□□□□□ -0.2
EDEM3-204ENST00000466392 NUP133Q8WUM0 1156 aa13.78□□□□□ -0.2
EDEM3-204ENST00000466392 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
EDEM3-204ENST00000466392 CYP39A1Q9NYL5 469 aa13.78□□□□□ -0.2
EDEM3-204ENST00000466392 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
EDEM3-204ENST00000466392 PALM3A6NDB9 673 aaPredicted RBP13.77□□□□□ -0.21
EDEM3-204ENST00000466392 POTEB2H3BUK9 544 aa13.77□□□□□ -0.21
EDEM3-204ENST00000466392 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
EDEM3-204ENST00000466392 ZNF865P0CJ78 1059 aaPredicted RBP13.77□□□□□ -0.21
EDEM3-204ENST00000466392 TROAPQ12815 778 aa13.77□□□□□ -0.21
EDEM3-204ENST00000466392 BAATQ14032 418 aaPredicted RBP13.77□□□□□ -0.21
EDEM3-204ENST00000466392 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
EDEM3-204ENST00000466392 CCDC144CPQ8IYA2 1237 aa13.77□□□□□ -0.21
EDEM3-204ENST00000466392 ZNF654Q8IZM8 581 aa13.77□□□□□ -0.21
EDEM3-204ENST00000466392 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.21
EDEM3-204ENST00000466392 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
EDEM3-204ENST00000466392 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
EDEM3-204ENST00000466392 PFASO15067 1338 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 WDR19Q8NEZ3 1342 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 PTPDC1A2A3K4 754 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 SEPT4O43236 478 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 CYTH3O43739 400 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 PPP1R11O60927 126 aaPredicted RBP13.76□□□□□ -0.21
EDEM3-204ENST00000466392 CALML3P27482 149 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 GJC2Q5T442 439 aaPredicted RBP13.76□□□□□ -0.21
EDEM3-204ENST00000466392 NFXL1Q6ZNB6 911 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 HOMER1Q86YM7 354 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 NEK1Q96PY6 1258 aa13.76□□□□□ -0.21
EDEM3-204ENST00000466392 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
EDEM3-204ENST00000466392 SYNGAP1Q96PV0 1343 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 ADCY6O43306 1168 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 PTGS1P23219 599 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 HSPA4P34932 840 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 IRX5P78411 483 aaPredicted RBP13.75□□□□□ -0.21
EDEM3-204ENST00000466392 MAMDC4Q6UXC1 1216 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 EEPD1Q7L9B9 569 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 CATIPQ7Z7H3 387 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 CMTR1Q8N1G2 835 aaKnown RBP13.75□□□□□ -0.21
EDEM3-204ENST00000466392 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 DPF3Q92784 378 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 PIGSQ96S52 555 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 CNPY2Q9Y2B0 182 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
EDEM3-204ENST00000466392 CCDC69A6NI79 296 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 PLEKHA8P1O95397 391 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 PGK1P00558 417 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
EDEM3-204ENST00000466392 TMEM63BQ5T3F8 832 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 RNF207Q6ZRF8 634 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 NECAB2Q7Z6G3 386 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 ZNF467Q7Z7K2 595 aaPredicted RBP13.74□□□□□ -0.21
EDEM3-204ENST00000466392 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 KATNBL1Q9H079 304 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 C11orf49Q9H6J7 331 aa13.74□□□□□ -0.21
EDEM3-204ENST00000466392 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.73□□□□□ -0.21
EDEM3-204ENST00000466392 MSCO60682 206 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 ALDH5A1P51649 535 aaPredicted RBP13.73□□□□□ -0.21
EDEM3-204ENST00000466392 EXOSC10Q01780 885 aaKnown RBP13.73□□□□□ -0.21
EDEM3-204ENST00000466392 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 CCDC144BQ3MJ40 725 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 TSGA10IPQ3SY00 556 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 FBXO16Q8IX29 292 aaPredicted RBP13.73□□□□□ -0.21
EDEM3-204ENST00000466392 MSL3Q8N5Y2 521 aaKnown RBP13.73□□□□□ -0.21
EDEM3-204ENST00000466392 MTMR8Q96EF0 704 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
EDEM3-204ENST00000466392 RIOX1Q9H6W3 641 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 COL20A1Q9P218 1284 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
EDEM3-204ENST00000466392 ABCB11O95342 1321 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 MYADML2A6NDP7 307 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 OPLAHO14841 1288 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 ZBTB5O15062 677 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 DDAH1O94760 285 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 REC8O95072 547 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 RARBP10826 455 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 COL6A1P12109 1028 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 AKR1A1P14550 325 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 ADCYAP1R1P41586 468 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 LIFRP42702 1097 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
EDEM3-204ENST00000466392 MICU3Q86XE3 530 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
EDEM3-204ENST00000466392 KCNB2Q92953 911 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 MTA3Q9BTC8 594 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 PDGFCQ9NRA1 345 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 NRBP1Q9UHY1 535 aa13.72□□□□□ -0.21
EDEM3-204ENST00000466392 SYNRGQ9UMZ2 1314 aa13.71□□□□□ -0.21
EDEM3-204ENST00000466392 hCG_1642624A0A1W2PR95 340 aa13.71□□□□□ -0.21
EDEM3-204ENST00000466392 H0YGN5 161 aa13.71□□□□□ -0.21
EDEM3-204ENST00000466392 CFBP00751 764 aa13.71□□□□□ -0.21
EDEM3-204ENST00000466392 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
EDEM3-204ENST00000466392 LRRC41Q15345 812 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms