RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 GNAQP50148 359 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 APOBRQ0VD83 1088 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 TOB2Q14106 344 aaPredicted RBP23.62■■□□□ 1.37
SKA3-205ENST00000465471 SYNE3Q6ZMZ3 975 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 TMTC3Q6ZXV5 915 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 RAB11FIP4Q86YS3 637 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 CLEC4DQ8WXI8 215 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 MAML3Q96JK9 1138 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 VAT1LQ9HCJ6 419 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 SLC5A4Q9NY91 659 aa23.62■■□□□ 1.37
SKA3-205ENST00000465471 DHX16O60231 1041 aaKnown RBP23.61■■□□□ 1.37
SKA3-205ENST00000465471 PPP1R11O60927 126 aaPredicted RBP23.61■■□□□ 1.37
SKA3-205ENST00000465471 UBXN2AP68543 259 aa23.61■■□□□ 1.37
SKA3-205ENST00000465471 FGD1P98174 961 aa23.61■■□□□ 1.37
SKA3-205ENST00000465471 TRIM32Q13049 653 aa23.61■■□□□ 1.37
SKA3-205ENST00000465471 CCDC144CPQ8IYA2 1237 aa23.61■■□□□ 1.37
SKA3-205ENST00000465471 ANKRD35Q8N283 1001 aa23.61■■□□□ 1.37
SKA3-205ENST00000465471 SRBD1Q8N5C6 995 aaKnown RBP23.61■■□□□ 1.37
SKA3-205ENST00000465471 FGD4Q96M96 766 aa23.61■■□□□ 1.37
SKA3-205ENST00000465471 PFASO15067 1338 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 ABCB11O95342 1321 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 NFIBO00712 420 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 MTFR1Q15390 333 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 FBXO11Q86XK2 927 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 PIGSQ96S52 555 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 MAF1Q9H063 256 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 ALDH8A1Q9H2A2 487 aaPredicted RBP23.6■■□□□ 1.37
SKA3-205ENST00000465471 FAM217BQ9NTX9 383 aaPredicted RBP23.6■■□□□ 1.37
SKA3-205ENST00000465471 RBM28Q9NW13 759 aaKnown RBP23.6■■□□□ 1.37
SKA3-205ENST00000465471 CYP39A1Q9NYL5 469 aa23.6■■□□□ 1.37
SKA3-205ENST00000465471 USH1GQ495M9 461 aa23.59■■□□□ 1.37
SKA3-205ENST00000465471 FAM133AQ8N9E0 248 aa23.59■■□□□ 1.37
SKA3-205ENST00000465471 DDX11Q96FC9 970 aa23.59■■□□□ 1.37
SKA3-205ENST00000465471 AMNQ9BXJ7 453 aa23.59■■□□□ 1.37
SKA3-205ENST00000465471 PNMA6FA0A0J9YX94 578 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 CCDC85CA6NKD9 419 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 GOLGA8AA7E2F4 631 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 GOLGA8BA8MQT2 603 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 FUT2Q10981 343 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 PPP2R5BQ15173 497 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 RTN1Q16799 776 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 ZNF467Q7Z7K2 595 aaPredicted RBP23.58■■□□□ 1.37
SKA3-205ENST00000465471 RGS22Q8NE09 1264 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 PDRG1Q9NUG6 133 aa23.58■■□□□ 1.37
SKA3-205ENST00000465471 BIN2Q9UBW5 565 aaPredicted RBP23.58■■□□□ 1.37
SKA3-205ENST00000465471 CNTNAP5Q8WYK1 1306 aa23.58■■□□□ 1.36
SKA3-205ENST00000465471 CCL5P13501 91 aa23.57■■□□□ 1.36
SKA3-205ENST00000465471 PRKAR2AP13861 404 aaKnown RBP23.57■■□□□ 1.36
SKA3-205ENST00000465471 CDC27P30260 824 aa23.57■■□□□ 1.36
SKA3-205ENST00000465471 CACNB2Q08289 660 aaPredicted RBP23.57■■□□□ 1.36
SKA3-205ENST00000465471 MAMDC4Q6UXC1 1216 aa23.57■■□□□ 1.36
SKA3-205ENST00000465471 HOMER1Q86YM7 354 aa23.57■■□□□ 1.36
SKA3-205ENST00000465471 CMTR1Q8N1G2 835 aaKnown RBP23.57■■□□□ 1.36
SKA3-205ENST00000465471 MSL3Q8N5Y2 521 aaKnown RBP23.57■■□□□ 1.36
SKA3-205ENST00000465471 UNC93B1Q9H1C4 597 aa23.57■■□□□ 1.36
SKA3-205ENST00000465471 PAK6Q9NQU5 681 aaPredicted RBP23.57■■□□□ 1.36
SKA3-205ENST00000465471 KIAA0100Q14667 2235 aaKnown RBP23.57■■□□□ 1.36
SKA3-205ENST00000465471 OPLAHO14841 1288 aa23.56■■□□□ 1.36
SKA3-205ENST00000465471 RBM25P49756 843 aaKnown RBP23.56■■□□□ 1.36
SKA3-205ENST00000465471 METAP2P50579 478 aaKnown RBP eCLIP23.56■■□□□ 1.36
SKA3-205ENST00000465471 CNTN2Q02246 1040 aa23.56■■□□□ 1.36
SKA3-205ENST00000465471 GHRHRQ02643 423 aa23.56■■□□□ 1.36
SKA3-205ENST00000465471 MFSD14CQ5VZR4 134 aa23.56■■□□□ 1.36
SKA3-205ENST00000465471 NSMFQ6X4W1 530 aa23.56■■□□□ 1.36
SKA3-205ENST00000465471 MRPL11Q9Y3B7 192 aaKnown RBP23.56■■□□□ 1.36
SKA3-205ENST00000465471 ASTN1O14525 1302 aa23.56■■□□□ 1.36
SKA3-205ENST00000465471 RPTORQ8N122 1335 aa23.56■■□□□ 1.36
SKA3-205ENST00000465471 POTEB2H3BUK9 544 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 PDIA3P30101 505 aaKnown RBP23.55■■□□□ 1.36
SKA3-205ENST00000465471 CYP2C19P33261 490 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 TRAF1Q13077 416 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 SLC30A10Q6XR72 485 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 RRP36Q96EU6 259 aaKnown RBP23.55■■□□□ 1.36
SKA3-205ENST00000465471 KIF2CQ99661 725 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 TINF2Q9BSI4 451 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 PCDHA1Q9Y5I3 950 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 LRRC37A2A6NM11 1700 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 SYNGAP1Q96PV0 1343 aa23.55■■□□□ 1.36
SKA3-205ENST00000465471 SOWAHBA6NEL2 793 aa23.54■■□□□ 1.36
SKA3-205ENST00000465471 CYBAP13498 195 aa23.54■■□□□ 1.36
SKA3-205ENST00000465471 BAATQ14032 418 aaPredicted RBP23.54■■□□□ 1.36
SKA3-205ENST00000465471 ZNF274Q96GC6 653 aaPredicted RBP23.54■■□□□ 1.36
SKA3-205ENST00000465471 C22orf23Q9BZE7 217 aa23.54■■□□□ 1.36
SKA3-205ENST00000465471 MCM3APO60318 1980 aa23.54■■□□□ 1.36
SKA3-205ENST00000465471 CCDC196A0A1B0GTZ2 297 aa23.53■■□□□ 1.36
SKA3-205ENST00000465471 MYCP01106 439 aaPredicted RBP23.53■■□□□ 1.36
SKA3-205ENST00000465471 ADD1P35611 737 aaKnown RBP23.53■■□□□ 1.36
SKA3-205ENST00000465471 RPS6P62753 249 aaKnown RBP23.53■■□□□ 1.36
SKA3-205ENST00000465471 RNF207Q6ZRF8 634 aa23.53■■□□□ 1.36
SKA3-205ENST00000465471 TRPV1Q8NER1 839 aa23.53■■□□□ 1.36
SKA3-205ENST00000465471 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.53■■□□□ 1.36
SKA3-205ENST00000465471 RNF208Q9H0X6 261 aa23.53■■□□□ 1.36
SKA3-205ENST00000465471 HMX1Q9NP08 348 aaPredicted RBP23.53■■□□□ 1.36
SKA3-205ENST00000465471 NRBP1Q9UHY1 535 aa23.53■■□□□ 1.36
SKA3-205ENST00000465471 NAP1L2Q9ULW6 460 aaPredicted RBP23.53■■□□□ 1.36
SKA3-205ENST00000465471 FRMPD3Q5JV73 1810 aa23.53■■□□□ 1.36
SKA3-205ENST00000465471 PTPDC1A2A3K4 754 aa23.52■■□□□ 1.36
SKA3-205ENST00000465471 POTEFA5A3E0 1075 aa23.52■■□□□ 1.36
SKA3-205ENST00000465471 GJB1P08034 283 aa23.52■■□□□ 1.36
SKA3-205ENST00000465471 MCF2L2Q86YR7 1114 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms