RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 CPLX2Q6PUV4 134 aaKnown RBP21.43■■□□□ 1.02
SCAMP3-204ENST00000465312 ZNF274Q96GC6 653 aaPredicted RBP21.43■■□□□ 1.02
SCAMP3-204ENST00000465312 MCOLN1Q9GZU1 580 aa21.43■■□□□ 1.02
SCAMP3-204ENST00000465312 SLC5A4Q9NY91 659 aa21.43■■□□□ 1.02
SCAMP3-204ENST00000465312 HPS5Q9UPZ3 1129 aa21.43■■□□□ 1.02
SCAMP3-204ENST00000465312 ABCB11O95342 1321 aa21.43■■□□□ 1.02
SCAMP3-204ENST00000465312 PNMA6FA0A0J9YX94 578 aa21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 TRAF1Q13077 416 aa21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 MAP2K5Q13163 448 aa21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 GRB14Q14449 540 aa21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 MUM1L1Q5H9M0 696 aa21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 KIF2CQ99661 725 aa21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 ALDH8A1Q9H2A2 487 aaPredicted RBP21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 TPCN1Q9ULQ1 816 aa21.42■■□□□ 1.02
SCAMP3-204ENST00000465312 CNTNAP5Q8WYK1 1306 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 PTPDC1A2A3K4 754 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 ADCY3O60266 1144 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 PPFIA3O75145 1194 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 PGK2P07205 417 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 SMARCA1P28370 1054 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 SLC35G1Q2M3R5 365 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 SLC9C1Q4G0N8 1177 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 APBA2Q99767 749 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 MRPL11Q9Y3B7 192 aaKnown RBP21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 PCDHA1Q9Y5I3 950 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 DOCK3Q8IZD9 2030 aa21.41■■□□□ 1.02
SCAMP3-204ENST00000465312 EVCP57679 992 aa21.4■■□□□ 1.02
SCAMP3-204ENST00000465312 MORN1Q5T089 497 aa21.4■■□□□ 1.02
SCAMP3-204ENST00000465312 HEATR3Q7Z4Q2 680 aa21.4■■□□□ 1.02
SCAMP3-204ENST00000465312 SLC26A6Q9BXS9 759 aa21.4■■□□□ 1.02
SCAMP3-204ENST00000465312 PFASO15067 1338 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 NFIBO00712 420 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 ELNP15502 786 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 TRIM22Q8IYM9 498 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 TNS4Q8IZW8 715 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 ABRAQ8N0Z2 381 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 PHKBQ93100 1093 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 MTMR8Q96EF0 704 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 A1CFQ9NQ94 594 aaKnown RBP21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 FAM217BQ9NTX9 383 aaPredicted RBP21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 GJD2Q9UKL4 321 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 LIMCH1Q9UPQ0 1083 aa21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 V9GY48 417 aaPredicted RBP21.39■■□□□ 1.01
SCAMP3-204ENST00000465312 NID2Q14112 1375 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 POTEB2H3BUK9 544 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 PPP1R11O60927 126 aaPredicted RBP21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 MYCP01106 439 aaPredicted RBP21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 CALML3P27482 149 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 GRK4P32298 578 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 RNF207Q6ZRF8 634 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 NECAB1Q8N987 351 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 SLAIN1Q8ND83 568 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 SH3TC2Q8TF17 1288 aa21.38■■□□□ 1.01
SCAMP3-204ENST00000465312 PFKFB2O60825 505 aa21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 CDKL5O76039 1030 aa21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 CFBP00751 764 aa21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 SSRP1Q08945 709 aaKnown RBP21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 SCRN1Q12765 414 aa21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 IRF5Q13568 498 aa21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 MCF2L2Q86YR7 1114 aa21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 GPKOWQ92917 476 aaPredicted RBP eCLIP21.37■■□□□ 1.01
SCAMP3-204ENST00000465312 ZNF236Q9UL36 1845 aa21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 SMCHD1A6NHR9 2005 aa21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 ZNFX1Q9P2E3 1918 aaKnown RBP21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 COBLO75128 1261 aa21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 LARGE1O95461 756 aa21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 BAATQ14032 418 aaPredicted RBP21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 CCL14Q16627 93 aa21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 ME3Q16798 604 aa21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 NPLOC4Q8TAT6 608 aa21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 RBM27Q9P2N5 1060 aaKnown RBP21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 RBBP6Q7Z6E9 1792 aaKnown RBP21.36■■□□□ 1.01
SCAMP3-204ENST00000465312 NAPAP54920 295 aa21.35■■□□□ 1.01
SCAMP3-204ENST00000465312 UBXN2AP68543 259 aa21.35■■□□□ 1.01
SCAMP3-204ENST00000465312 SLC30A10Q6XR72 485 aa21.35■■□□□ 1.01
SCAMP3-204ENST00000465312 TRMT44Q8IYL2 757 aaKnown RBP21.35■■□□□ 1.01
SCAMP3-204ENST00000465312 CLEC4DQ8WXI8 215 aa21.35■■□□□ 1.01
SCAMP3-204ENST00000465312 ZSCAN31Q96LW9 406 aaPredicted RBP21.35■■□□□ 1.01
SCAMP3-204ENST00000465312 CYP39A1Q9NYL5 469 aa21.35■■□□□ 1.01
SCAMP3-204ENST00000465312 XRCC5P13010 732 aaKnown RBP21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 IFNAR1P17181 557 aa21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 RPS6P62753 249 aaKnown RBP21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 MFSD14CQ5VZR4 134 aa21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 CCDC83Q8IWF9 413 aa21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 TRIB2Q92519 343 aa21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 USP6NLQ92738 828 aa21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 CUL5Q93034 780 aa21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 RNF26Q9BY78 433 aaPredicted RBP21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 PLXNA1Q9UIW2 1896 aa21.34■■□□□ 1.01
SCAMP3-204ENST00000465312 PRPF3O43395 683 aaKnown RBP21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 HMGCRP04035 888 aa21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 CNTN2Q02246 1040 aa21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 FUT2Q10981 343 aa21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 WWC2Q6AWC2 1192 aa21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 PXYLP1Q8TE99 480 aa21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 GTF3C6Q969F1 213 aa21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 MAML3Q96JK9 1138 aa21.33■■□□□ 1.01
SCAMP3-204ENST00000465312 DTNBO60941 627 aa21.32■■□□□ 1
SCAMP3-204ENST00000465312 INHAP05111 366 aa21.32■■□□□ 1
SCAMP3-204ENST00000465312 HOXC6P09630 235 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms