RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 CYP2D7A0A087X1C5 515 aa18.21■□□□□ 0.51
NCSTN-210ENST00000465223 RBAK-RBAKDNI3L0D1 243 aa18.21■□□□□ 0.51
NCSTN-210ENST00000465223 SUPT20HL2P0C7V6 817 aa18.21■□□□□ 0.51
NCSTN-210ENST00000465223 FOXK2Q01167 660 aa18.21■□□□□ 0.51
NCSTN-210ENST00000465223 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
NCSTN-210ENST00000465223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.21■□□□□ 0.51
NCSTN-210ENST00000465223 NEK9Q8TD19 979 aa18.21■□□□□ 0.51
NCSTN-210ENST00000465223 CCDC17Q96LX7 622 aa18.21■□□□□ 0.51
NCSTN-210ENST00000465223 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.5
NCSTN-210ENST00000465223 KCNJ6P48051 423 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 CDK8P49336 464 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 ERVK-21P61565 698 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 DEFB103AP81534 67 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 PUS10Q3MIT2 529 aaKnown RBP18.2■□□□□ 0.5
NCSTN-210ENST00000465223 EEPD1Q7L9B9 569 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 LCORLQ8N3X6 602 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
NCSTN-210ENST00000465223 ZBED2Q9BTP6 218 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 CACNA1AO00555 2505 aa18.2■□□□□ 0.5
NCSTN-210ENST00000465223 SOWAHBA6NEL2 793 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 C19orf67A6NJJ6 358 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 E9PSI1 815 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 ATP2A1O14983 1001 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 GFRA3O60609 400 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 GNAI2P04899 355 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 IRS1P35568 1242 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 PTPN5P54829 565 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 WDR5P61964 334 aaKnown RBP18.19■□□□□ 0.5
NCSTN-210ENST00000465223 USP34Q70CQ2 3546 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 FAM133AQ8N9E0 248 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 TGS1Q96RS0 853 aaKnown RBP18.19■□□□□ 0.5
NCSTN-210ENST00000465223 KANSL2Q9H9L4 492 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 HOMER2Q9NSB8 354 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 FAM86C1Q9NVL1 165 aa18.19■□□□□ 0.5
NCSTN-210ENST00000465223 LINC01553A4QN01 128 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 PRKAB2O43741 272 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 ZBED4O75132 1171 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 BAIAP3O94812 1187 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 TCF15Q12870 199 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 FAM47CQ5HY64 1035 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 TAPT1Q6NXT6 567 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
NCSTN-210ENST00000465223 PRPF38AQ8NAV1 312 aaKnown RBP18.18■□□□□ 0.5
NCSTN-210ENST00000465223 RETREG2Q8NC44 543 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 KIFC2Q96AC6 838 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 MUTYHQ9UIF7 546 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 CTDP1Q9Y5B0 961 aaPredicted RBP18.18■□□□□ 0.5
NCSTN-210ENST00000465223 TECTAO75443 2155 aa18.18■□□□□ 0.5
NCSTN-210ENST00000465223 PDE6AP16499 860 aa18.17■□□□□ 0.5
NCSTN-210ENST00000465223 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
NCSTN-210ENST00000465223 EP400NLQ6ZTU2 488 aa18.17■□□□□ 0.5
NCSTN-210ENST00000465223 CHST13Q8NET6 341 aa18.17■□□□□ 0.5
NCSTN-210ENST00000465223 EAF2Q96CJ1 260 aaPredicted RBP18.17■□□□□ 0.5
NCSTN-210ENST00000465223 FBXO40Q9UH90 709 aa18.17■□□□□ 0.5
NCSTN-210ENST00000465223 MYL3P08590 195 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 PURAQ00577 322 aaKnown RBP18.16■□□□□ 0.5
NCSTN-210ENST00000465223 SLC9C2Q5TAH2 1124 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 IQSEC1Q6DN90 963 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 ADHFE1Q8IWW8 467 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.16■□□□□ 0.5
NCSTN-210ENST00000465223 ARMT1Q9H993 441 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 SLC38A10Q9HBR0 1119 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 PRKAG3Q9UGI9 489 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 Q9Y3F1 56 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
NCSTN-210ENST00000465223 GREB1LQ9C091 1923 aaPredicted RBP18.15■□□□□ 0.5
NCSTN-210ENST00000465223 SCN10AQ9Y5Y9 1956 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 ZDBF2Q9HCK1 2354 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 F5H6K3 240 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 PITPNM1O00562 1244 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 SURF6O75683 361 aaKnown RBP18.15■□□□□ 0.5
NCSTN-210ENST00000465223 NDUFB10O96000 172 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 KLRC3Q07444 240 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 GPNMBQ14956 572 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 TCTN1Q2MV58 587 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 FAM117BQ6P1L5 589 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 TMED8Q6PL24 325 aaPredicted RBP18.15■□□□□ 0.5
NCSTN-210ENST00000465223 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 C17orf80Q9BSJ5 609 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 CFAP54Q96N23 3096 aa18.15■□□□□ 0.5
NCSTN-210ENST00000465223 KMT2EQ8IZD2 1858 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 ASB14A6NK59 587 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 GJB5O95377 273 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 POLA2Q14181 598 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 NBPF20Q3BBV1 942 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 C12orf60Q5U649 245 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 FBXO22Q8NEZ5 403 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 RAD9AQ99638 391 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
NCSTN-210ENST00000465223 A1CFQ9NQ94 594 aaKnown RBP18.14■□□□□ 0.49
NCSTN-210ENST00000465223 POLR3EQ9NVU0 708 aa18.14■□□□□ 0.49
NCSTN-210ENST00000465223 LCTP09848 1927 aa18.13■□□□□ 0.49
NCSTN-210ENST00000465223 TCRBV5S4A2TA0A5A2 114 aa18.13■□□□□ 0.49
NCSTN-210ENST00000465223 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
NCSTN-210ENST00000465223 HERC4Q5GLZ8 1057 aaPredicted RBP18.13■□□□□ 0.49
NCSTN-210ENST00000465223 TNNQ9UQP3 1299 aa18.13■□□□□ 0.49
NCSTN-210ENST00000465223 MYH4Q9Y623 1939 aa18.13■□□□□ 0.49
NCSTN-210ENST00000465223 USP17L12C9JPN9 530 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms