RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 ADCY6O43306 1168 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 CHMLP26374 656 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 GPATCH4Q5T3I0 446 aaKnown RBP30.34■■■□□ 2.45
U2AF1-206ENST00000464750 KAT14Q9H8E8 782 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 CNNM2Q9H8M5 875 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 ZSWIM5Q9P217 1185 aa30.34■■■□□ 2.45
U2AF1-206ENST00000464750 A0A1W2PQ45 241 aaPredicted RBP30.33■■■□□ 2.45
U2AF1-206ENST00000464750 A0A1W2PQY0 241 aa30.33■■■□□ 2.45
U2AF1-206ENST00000464750 GOLGA8HP0CJ92 632 aa30.33■■■□□ 2.45
U2AF1-206ENST00000464750 C1orf53Q5VUE5 145 aa30.33■■■□□ 2.45
U2AF1-206ENST00000464750 ENAHQ8N8S7 591 aaPredicted RBP30.33■■■□□ 2.45
U2AF1-206ENST00000464750 NFIBO00712 420 aa30.32■■■□□ 2.44
U2AF1-206ENST00000464750 TDHQ8IZJ6 230 aa30.32■■■□□ 2.44
U2AF1-206ENST00000464750 KLHDC9Q8NEP7 349 aa30.32■■■□□ 2.44
U2AF1-206ENST00000464750 ANKS1AQ92625 1134 aa30.32■■■□□ 2.44
U2AF1-206ENST00000464750 LBHD1Q9BQE6 289 aaPredicted RBP30.32■■■□□ 2.44
U2AF1-206ENST00000464750 TSEN34Q9BSV6 310 aaKnown RBP30.32■■■□□ 2.44
U2AF1-206ENST00000464750 PRDM5Q9NQX1 630 aaPredicted RBP30.32■■■□□ 2.44
U2AF1-206ENST00000464750 MYH6P13533 1939 aa30.32■■■□□ 2.44
U2AF1-206ENST00000464750 WDR19Q8NEZ3 1342 aa30.31■■■□□ 2.44
U2AF1-206ENST00000464750 MYADML2A6NDP7 307 aa30.31■■■□□ 2.44
U2AF1-206ENST00000464750 SOX1O00570 391 aaPredicted RBP30.31■■■□□ 2.44
U2AF1-206ENST00000464750 UBAC1Q9BSL1 405 aa30.31■■■□□ 2.44
U2AF1-206ENST00000464750 PNMA2Q9UL42 364 aa30.31■■■□□ 2.44
U2AF1-206ENST00000464750 DDX49Q9Y6V7 483 aaKnown RBP30.31■■■□□ 2.44
U2AF1-206ENST00000464750 C6orf222P0C671 652 aaPredicted RBP30.3■■■□□ 2.44
U2AF1-206ENST00000464750 ACLYP53396 1101 aa30.3■■■□□ 2.44
U2AF1-206ENST00000464750 PURBQ96QR8 312 aaKnown RBP30.3■■■□□ 2.44
U2AF1-206ENST00000464750 UPF3AQ9H1J1 476 aaKnown RBP30.3■■■□□ 2.44
U2AF1-206ENST00000464750 CPVLQ9H3G5 476 aa30.3■■■□□ 2.44
U2AF1-206ENST00000464750 SPC25Q9HBM1 224 aa30.3■■■□□ 2.44
U2AF1-206ENST00000464750 PDLIM7Q9NR12 457 aa30.3■■■□□ 2.44
U2AF1-206ENST00000464750 MOXD2PA6NHM9 499 aa30.29■■■□□ 2.44
U2AF1-206ENST00000464750 CST5P28325 142 aaPredicted RBP30.29■■■□□ 2.44
U2AF1-206ENST00000464750 IRX5P78411 483 aaPredicted RBP30.29■■■□□ 2.44
U2AF1-206ENST00000464750 PTH1RQ03431 593 aa30.29■■■□□ 2.44
U2AF1-206ENST00000464750 BAATQ14032 418 aaPredicted RBP30.29■■■□□ 2.44
U2AF1-206ENST00000464750 UBA5Q9GZZ9 404 aa30.29■■■□□ 2.44
U2AF1-206ENST00000464750 STARD7Q9NQZ5 370 aa30.29■■■□□ 2.44
U2AF1-206ENST00000464750 PTPDC1A2A3K4 754 aa30.28■■■□□ 2.44
U2AF1-206ENST00000464750 GJA9P57773 515 aa30.28■■■□□ 2.44
U2AF1-206ENST00000464750 TLE2Q04725 743 aa30.28■■■□□ 2.44
U2AF1-206ENST00000464750 KCNA10Q16322 511 aa30.28■■■□□ 2.44
U2AF1-206ENST00000464750 CCSAPQ6IQ19 270 aaPredicted RBP30.28■■■□□ 2.44
U2AF1-206ENST00000464750 SLC30A10Q6XR72 485 aa30.28■■■□□ 2.44
U2AF1-206ENST00000464750 CLEC4DQ8WXI8 215 aa30.28■■■□□ 2.44
U2AF1-206ENST00000464750 LRCH3Q96II8 777 aa30.28■■■□□ 2.44
U2AF1-206ENST00000464750 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.27■■■□□ 2.44
U2AF1-206ENST00000464750 TNFAIP2Q03169 654 aa30.27■■■□□ 2.44
U2AF1-206ENST00000464750 ASPRV1Q53RT3 343 aa30.27■■■□□ 2.44
U2AF1-206ENST00000464750 FBXO16Q8IX29 292 aaPredicted RBP30.27■■■□□ 2.44
U2AF1-206ENST00000464750 NUP133Q8WUM0 1156 aa30.27■■■□□ 2.44
U2AF1-206ENST00000464750 SGSM2O43147 1006 aa30.26■■■□□ 2.43
U2AF1-206ENST00000464750 CYP21A2P08686 494 aa30.26■■■□□ 2.43
U2AF1-206ENST00000464750 ALDH5A1P51649 535 aaPredicted RBP30.26■■■□□ 2.43
U2AF1-206ENST00000464750 IFIT1BQ5T764 474 aaKnown RBP30.26■■■□□ 2.43
U2AF1-206ENST00000464750 NOL8Q76FK4 1167 aaKnown RBP30.26■■■□□ 2.43
U2AF1-206ENST00000464750 EEPD1Q7L9B9 569 aa30.26■■■□□ 2.43
U2AF1-206ENST00000464750 PCSK9Q8NBP7 692 aaKnown RBP30.26■■■□□ 2.43
U2AF1-206ENST00000464750 ADD3Q9UEY8 706 aaKnown RBP30.26■■■□□ 2.43
U2AF1-206ENST00000464750 U3KPZ7 1027 aaPredicted RBP30.26■■■□□ 2.43
U2AF1-206ENST00000464750 PQBP1O60828 265 aaKnown RBP30.25■■■□□ 2.43
U2AF1-206ENST00000464750 CALML3P27482 149 aa30.25■■■□□ 2.43
U2AF1-206ENST00000464750 TRDNQ13061 729 aa30.25■■■□□ 2.43
U2AF1-206ENST00000464750 CDC37Q16543 378 aaPredicted RBP30.25■■■□□ 2.43
U2AF1-206ENST00000464750 USH1GQ495M9 461 aa30.25■■■□□ 2.43
U2AF1-206ENST00000464750 RNF207Q6ZRF8 634 aa30.25■■■□□ 2.43
U2AF1-206ENST00000464750 CYB5R4Q7L1T6 521 aa30.25■■■□□ 2.43
U2AF1-206ENST00000464750 SH3RF1Q7Z6J0 888 aa30.25■■■□□ 2.43
U2AF1-206ENST00000464750 MORC4Q8TE76 937 aa30.25■■■□□ 2.43
U2AF1-206ENST00000464750 ASGR1P07306 291 aa30.24■■■□□ 2.43
U2AF1-206ENST00000464750 LRIT3Q3SXY7 679 aa30.24■■■□□ 2.43
U2AF1-206ENST00000464750 GLT1D1Q96MS3 346 aa30.24■■■□□ 2.43
U2AF1-206ENST00000464750 VTA1Q9NP79 307 aa30.24■■■□□ 2.43
U2AF1-206ENST00000464750 PDGFCQ9NRA1 345 aa30.24■■■□□ 2.43
U2AF1-206ENST00000464750 TRIM43BA6NCK2 446 aa30.23■■■□□ 2.43
U2AF1-206ENST00000464750 CLTBP09497 229 aa30.23■■■□□ 2.43
U2AF1-206ENST00000464750 PARP1P09874 1014 aaKnown RBP30.23■■■□□ 2.43
U2AF1-206ENST00000464750 SEC23AQ15436 765 aa30.23■■■□□ 2.43
U2AF1-206ENST00000464750 GNASQ5JWF2 1037 aa30.23■■■□□ 2.43
U2AF1-206ENST00000464750 TLK2Q86UE8 772 aa30.23■■■□□ 2.43
U2AF1-206ENST00000464750 ADGRF4Q8IZF3 695 aa30.23■■■□□ 2.43
U2AF1-206ENST00000464750 TRIM43Q96BQ3 446 aaPredicted RBP30.23■■■□□ 2.43
U2AF1-206ENST00000464750 GNEQ9Y223 722 aaKnown RBP30.23■■■□□ 2.43
U2AF1-206ENST00000464750 CTAGE5O15320 804 aa30.22■■■□□ 2.43
U2AF1-206ENST00000464750 SMPD1P17405 629 aa30.22■■■□□ 2.43
U2AF1-206ENST00000464750 RPS6P62753 249 aaKnown RBP30.22■■■□□ 2.43
U2AF1-206ENST00000464750 TAPT1Q6NXT6 567 aa30.22■■■□□ 2.43
U2AF1-206ENST00000464750 LOC102724159A0A0B4J2E5 919 aa30.21■■■□□ 2.43
U2AF1-206ENST00000464750 DHX16O60231 1041 aaKnown RBP30.21■■■□□ 2.43
U2AF1-206ENST00000464750 NKX3-2P78367 333 aa30.21■■■□□ 2.43
U2AF1-206ENST00000464750 BEX3Q00994 111 aa30.21■■■□□ 2.43
U2AF1-206ENST00000464750 PWP2Q15269 919 aaKnown RBP30.21■■■□□ 2.43
U2AF1-206ENST00000464750 BADQ92934 168 aa30.21■■■□□ 2.43
U2AF1-206ENST00000464750 TAF6LQ9Y6J9 622 aa30.21■■■□□ 2.43
U2AF1-206ENST00000464750 ELP1O95163 1332 aa30.21■■■□□ 2.43
U2AF1-206ENST00000464750 PTGS1P23219 599 aa30.2■■■□□ 2.43
U2AF1-206ENST00000464750 IQSEC1Q6DN90 963 aa30.2■■■□□ 2.43
U2AF1-206ENST00000464750 ANKRD33Q7Z3H0 272 aa30.2■■■□□ 2.43
U2AF1-206ENST00000464750 RALYLQ86SE5 291 aaKnown RBP30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms