RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 VAT1LQ9HCJ6 419 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 PCDH10Q9P2E7 1040 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 MAD2L2Q9UI95 211 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 CNPY2Q9Y2B0 182 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 ADCY6O43306 1168 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 EVI5O60447 810 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 USH1GQ495M9 461 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 KATNBL1Q9H079 304 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 LCTP09848 1927 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 PALM3A6NDB9 673 aaPredicted RBP15.15■□□□□ 0.02
XRN1-203ENST00000463916 DNM1LO00429 736 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 PGK1P00558 417 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
XRN1-203ENST00000463916 TROAPQ12815 778 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 ACVR2BQ13705 512 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 WTAPQ15007 396 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 CDC37Q16543 378 aaPredicted RBP15.15■□□□□ 0.02
XRN1-203ENST00000463916 TMEM67Q5HYA8 995 aa15.15■□□□□ 0.02
XRN1-203ENST00000463916 SENP6Q9GZR1 1112 aaPredicted RBP15.15■□□□□ 0.02
XRN1-203ENST00000463916 ZHX1Q9UKY1 873 aaPredicted RBP15.15■□□□□ 0.02
XRN1-203ENST00000463916 WDR19Q8NEZ3 1342 aa15.14■□□□□ 0.01
XRN1-203ENST00000463916 KLRF2D3W0D1 207 aa15.14■□□□□ 0.01
XRN1-203ENST00000463916 LRRC41Q15345 812 aa15.14■□□□□ 0.01
XRN1-203ENST00000463916 LRRC26Q2I0M4 334 aa15.14■□□□□ 0.01
XRN1-203ENST00000463916 SLC30A10Q6XR72 485 aa15.14■□□□□ 0.01
XRN1-203ENST00000463916 LY9Q9HBG7 655 aa15.14■□□□□ 0.01
XRN1-203ENST00000463916 LAMA3Q16787 3333 aa15.14■□□□□ 0.01
XRN1-203ENST00000463916 ERICH2A1L162 156 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 RARBP10826 455 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 AKR1A1P14550 325 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 IRX5P78411 483 aaPredicted RBP15.13■□□□□ 0.01
XRN1-203ENST00000463916 QRICH1Q2TAL8 776 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 ARRDC4Q8NCT1 418 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 TBC1D5Q92609 795 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 ABHD16BQ9H3Z7 469 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 XPNPEP3Q9NQH7 507 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 PRC1O43663 620 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 GRM4Q14833 912 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 SART3Q15020 963 aaKnown RBP15.13■□□□□ 0.01
XRN1-203ENST00000463916 CCDC144BQ3MJ40 725 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
XRN1-203ENST00000463916 DHX16O60231 1041 aaKnown RBP15.12■□□□□ 0.01
XRN1-203ENST00000463916 PPP1R11O60927 126 aaPredicted RBP15.12■□□□□ 0.01
XRN1-203ENST00000463916 CALML3P27482 149 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 ATN1P54259 1190 aaPredicted RBP15.12■□□□□ 0.01
XRN1-203ENST00000463916 RPS6P62753 249 aaKnown RBP15.12■□□□□ 0.01
XRN1-203ENST00000463916 CASC1Q6TDU7 716 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 RNF207Q6ZRF8 634 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 C7orf61Q8IZ16 206 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 MYL10Q9BUA6 226 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 LRRC2Q9BYS8 371 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 FAM184BQ9ULE4 1060 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 SZT2Q5T011 3432 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 LAMA2P24043 3122 aaKnown RBP15.12■□□□□ 0.01
XRN1-203ENST00000463916 CYTH3O43739 400 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 ADAMTS4O75173 837 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 PTGS1P23219 599 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 MCM5P33992 734 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 TMEM63BQ5T3F8 832 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 EEPD1Q7L9B9 569 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 MTMR8Q96EF0 704 aa15.12■□□□□ 0.01
XRN1-203ENST00000463916 COLQQ9Y215 455 aaPredicted RBP15.12■□□□□ 0.01
XRN1-203ENST00000463916 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.11■□□□□ 0.01
XRN1-203ENST00000463916 ASB14A6NK59 587 aa15.11■□□□□ 0.01
XRN1-203ENST00000463916 ADCYAP1R1P41586 468 aa15.11■□□□□ 0.01
XRN1-203ENST00000463916 ADCK5Q3MIX3 580 aa15.11■□□□□ 0.01
XRN1-203ENST00000463916 FERMT2Q96AC1 680 aa15.11■□□□□ 0.01
XRN1-203ENST00000463916 PDGFCQ9NRA1 345 aa15.11■□□□□ 0.01
XRN1-203ENST00000463916 PNMA2Q9UL42 364 aa15.11■□□□□ 0.01
XRN1-203ENST00000463916 SYNRGQ9UMZ2 1314 aa15.11■□□□□ 0.01
XRN1-203ENST00000463916 BAZ2BQ9UIF8 2168 aaKnown RBP15.11■□□□□ 0.01
XRN1-203ENST00000463916 MYADML2A6NDP7 307 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 SH2B2O14492 632 aaPredicted RBP15.1■□□□□ 0.01
XRN1-203ENST00000463916 CENPBP07199 599 aaPredicted RBP15.1■□□□□ 0.01
XRN1-203ENST00000463916 ALDH5A1P51649 535 aaPredicted RBP15.1■□□□□ 0.01
XRN1-203ENST00000463916 CATIPQ7Z7H3 387 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 FBXO11Q86XK2 927 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 MORC4Q8TE76 937 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 NUP133Q8WUM0 1156 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 RIOX1Q9H6W3 641 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 ZMYND8Q9ULU4 1186 aaPredicted RBP15.1■□□□□ 0.01
XRN1-203ENST00000463916 KBTBD13C9JR72 458 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 OPLAHO14841 1288 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 DUSP11O75319 330 aaKnown RBP15.1■□□□□ 0.01
XRN1-203ENST00000463916 SYN1P17600 705 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 TAPT1Q6NXT6 567 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 FBXO16Q8IX29 292 aaPredicted RBP15.1■□□□□ 0.01
XRN1-203ENST00000463916 ZNF654Q8IZM8 581 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 PIGSQ96S52 555 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 COL20A1Q9P218 1284 aa15.1■□□□□ 0.01
XRN1-203ENST00000463916 RNF20Q5VTR2 975 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 ERICH6BQ5W0A0 696 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 CCSAPQ6IQ19 270 aaPredicted RBP15.09■□□□□ 0.01
XRN1-203ENST00000463916 CHRDL2Q6WN34 429 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 RNF180Q86T96 592 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 RGS22Q8NE09 1264 aa15.09■□□□□ 0.01
XRN1-203ENST00000463916 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms