RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CENPBP07199 599 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-202ENST00000463440 BAATQ14032 418 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-202ENST00000463440 LRRC41Q15345 812 aa18.94■□□□□ 0.62
COL1A1-202ENST00000463440 CDC37Q16543 378 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-202ENST00000463440 TMEM67Q5HYA8 995 aa18.94■□□□□ 0.62
COL1A1-202ENST00000463440 CHST3Q7LGC8 479 aa18.94■□□□□ 0.62
COL1A1-202ENST00000463440 MB21D2Q8IYB1 491 aaPredicted RBP18.94■□□□□ 0.62
COL1A1-202ENST00000463440 CEP290O15078 2479 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 PTPDC1A2A3K4 754 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 NECTIN1Q15223 517 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 USH1GQ495M9 461 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 RNF20Q5VTR2 975 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 CREB3L3Q68CJ9 461 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 RNF180Q86T96 592 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 C7orf61Q8IZ16 206 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 CLEC4DQ8WXI8 215 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 MTA3Q9BTC8 594 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 VAT1LQ9HCJ6 419 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 ADD3Q9UEY8 706 aaKnown RBP18.93■□□□□ 0.62
COL1A1-202ENST00000463440 ALPK3Q96L96 1907 aa18.93■□□□□ 0.62
COL1A1-202ENST00000463440 MCM3APO60318 1980 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 KLRF2D3W0D1 207 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 MCM5P33992 734 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 ANTXR2P58335 489 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 CATIPQ7Z7H3 387 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 STAG2Q8N3U4 1231 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 IGDCC4Q8TDY8 1250 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 JMJD4Q9H9V9 463 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 MAD2L2Q9UI95 211 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 ABCB11O95342 1321 aa18.92■□□□□ 0.62
COL1A1-202ENST00000463440 LOC102724159A0A0B4J2E5 919 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 PALM3A6NDB9 673 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-202ENST00000463440 PRC1O43663 620 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 DUSP11O75319 330 aaKnown RBP18.91■□□□□ 0.62
COL1A1-202ENST00000463440 PGK1P00558 417 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 CALML3P27482 149 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 GRM4Q14833 912 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 PWP2Q15269 919 aaKnown RBP18.91■□□□□ 0.62
COL1A1-202ENST00000463440 LRRC26Q2I0M4 334 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 QRICH1Q2TAL8 776 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 CCDC144BQ3MJ40 725 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 ERICH6BQ5W0A0 696 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 FBXO11Q86XK2 927 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 MAF1Q9H063 256 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 SENP2Q9HC62 589 aa18.91■□□□□ 0.62
COL1A1-202ENST00000463440 SLC30A10Q6XR72 485 aa18.9■□□□□ 0.62
COL1A1-202ENST00000463440 TMTC2Q8N394 836 aa18.9■□□□□ 0.62
COL1A1-202ENST00000463440 RGS22Q8NE09 1264 aa18.9■□□□□ 0.62
COL1A1-202ENST00000463440 LENG1Q96BZ8 264 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-202ENST00000463440 TMEM87BQ96K49 555 aa18.9■□□□□ 0.62
COL1A1-202ENST00000463440 MPHOSPH6Q99547 160 aaKnown RBP18.9■□□□□ 0.62
COL1A1-202ENST00000463440 KATNBL1Q9H079 304 aa18.9■□□□□ 0.62
COL1A1-202ENST00000463440 SPC25Q9HBM1 224 aa18.9■□□□□ 0.62
COL1A1-202ENST00000463440 ASTN1O14525 1302 aa18.9■□□□□ 0.62
COL1A1-202ENST00000463440 ADCYAP1R1P41586 468 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 ALDH5A1P51649 535 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-202ENST00000463440 ATN1P54259 1190 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-202ENST00000463440 RPS6P62753 249 aaKnown RBP18.89■□□□□ 0.61
COL1A1-202ENST00000463440 TROAPQ12815 778 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 CHRDL2Q6WN34 429 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 MCF2L2Q86YR7 1114 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 MORC4Q8TE76 937 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 PURBQ96QR8 312 aaKnown RBP18.89■□□□□ 0.61
COL1A1-202ENST00000463440 AMNQ9BXJ7 453 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 LY9Q9HBG7 655 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 PPP4R2Q9NY27 417 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 PHF24Q9UPV7 400 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 COLQQ9Y215 455 aaPredicted RBP18.89■□□□□ 0.61
COL1A1-202ENST00000463440 MRPL11Q9Y3B7 192 aaKnown RBP18.89■□□□□ 0.61
COL1A1-202ENST00000463440 SYNRGQ9UMZ2 1314 aa18.89■□□□□ 0.61
COL1A1-202ENST00000463440 B4DLN1 442 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 ADAMTS4O75173 837 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 MRPL12P52815 198 aaKnown RBP18.88■□□□□ 0.61
COL1A1-202ENST00000463440 NFXL1Q6ZNB6 911 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 DNERQ8NFT8 737 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 FERMT2Q96AC1 680 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 MTMR8Q96EF0 704 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 TSEN34Q9BSV6 310 aaKnown RBP18.88■□□□□ 0.61
COL1A1-202ENST00000463440 VTA1Q9NP79 307 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 ZMYND8Q9ULU4 1186 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-202ENST00000463440 MYH6P13533 1939 aa18.88■□□□□ 0.61
COL1A1-202ENST00000463440 CCDC69A6NI79 296 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 ZBTB5O15062 677 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 DDAH1O94760 285 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 LCTP09848 1927 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 C6orf222P0C671 652 aaPredicted RBP18.87■□□□□ 0.61
COL1A1-202ENST00000463440 TNFAIP2Q03169 654 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 TRAF1Q13077 416 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 HABP4Q5JVS0 413 aaKnown RBP18.87■□□□□ 0.61
COL1A1-202ENST00000463440 SLC39A5Q6ZMH5 540 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 NOL8Q76FK4 1167 aaKnown RBP18.87■□□□□ 0.61
COL1A1-202ENST00000463440 ZNF654Q8IZM8 581 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 CTCFLQ8NI51 663 aaPredicted RBP18.87■□□□□ 0.61
COL1A1-202ENST00000463440 NUP133Q8WUM0 1156 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 MAP3K14Q99558 947 aa18.87■□□□□ 0.61
COL1A1-202ENST00000463440 SH2B2O14492 632 aaPredicted RBP18.86■□□□□ 0.61
COL1A1-202ENST00000463440 KIF5BP33176 963 aa18.86■□□□□ 0.61
COL1A1-202ENST00000463440 LIFRP42702 1097 aa18.86■□□□□ 0.61
COL1A1-202ENST00000463440 GJA9P57773 515 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms