RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 RRAGBQ5VZM2 374 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 DCAF4Q8WV16 495 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 MTMR9Q96QG7 549 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 CSRNP1Q96S65 589 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 PLIN2Q99541 437 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 ZNF70Q9UC06 446 aaPredicted RBP11.5□□□□□ -0.57
MSH5-211ENST00000463144 CNTNAP1P78357 1384 aa11.5□□□□□ -0.57
MSH5-211ENST00000463144 F5H6K3 240 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 SLC37A4O43826 429 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 TDP2O95551 362 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 GH2P01242 217 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 UBA7P41226 1012 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 SLC1A4P43007 532 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 STX17P56962 302 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 GSDMDP57764 484 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 KLRC3Q07444 240 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 QRICH1Q2TAL8 776 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 CT47A1Q5JQC4 288 aaPredicted RBP11.49□□□□□ -0.57
MSH5-211ENST00000463144 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 NUP88Q99567 741 aaPredicted RBP11.49□□□□□ -0.57
MSH5-211ENST00000463144 MMTAG2Q9BU76 263 aaKnown RBP11.49□□□□□ -0.57
MSH5-211ENST00000463144 A0A1W2PRG0 241 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 CBFA2T2O43439 604 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 SKILP12757 684 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 TECP42680 631 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 DLGAP5Q15398 846 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 CABP7Q86V35 215 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 AK8Q96MA6 479 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 MYH7BA7E2Y1 1941 aa11.49□□□□□ -0.57
MSH5-211ENST00000463144 NDUFB10O96000 172 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 ORC2Q13416 577 aaPredicted RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 DNTTIP2Q5QJE6 756 aaKnown RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 RBM26Q5T8P6 1007 aaKnown RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 SPATA1Q5VX52 437 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 VSTM4Q8IW00 320 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 CDAN1Q8IWY9 1227 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 IGSF22Q8N9C0 903 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 KBTBD4Q9NVX7 518 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 ATF5Q9Y2D1 282 aaPredicted RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 KLRC4O43908 158 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 COBLO75128 1261 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 ZBTB7AO95365 584 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 TXKP42681 527 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 TNNI2P48788 182 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 SNAP25P60880 206 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 CDC37Q16543 378 aaPredicted RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 APTXQ7Z2E3 356 aaKnown RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 CUL5Q93034 780 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 VPS33BQ9H267 617 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 PSTPIP2Q9H939 334 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
MSH5-211ENST00000463144 ZNRF3Q9ULT6 936 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 SYNRGQ9UMZ2 1314 aa11.48□□□□□ -0.57
MSH5-211ENST00000463144 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 PLCG1P19174 1290 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
MSH5-211ENST00000463144 MRPL12P52815 198 aaKnown RBP11.47□□□□□ -0.57
MSH5-211ENST00000463144 TERF1P54274 439 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 CXCL9Q07325 125 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 CDKAL1Q5VV42 579 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP17L6PQ6QN14 398 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSH5-211ENST00000463144 TMOD2Q9NZR1 351 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 HERC5Q9UII4 1024 aaKnown RBP11.47□□□□□ -0.57
MSH5-211ENST00000463144 HDAC9Q9UKV0 1011 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 GDAQ9Y2T3 454 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 USP27XA6NNY8 438 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 CALCRLQ16602 461 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 KIAA1755Q5JYT7 1200 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
MSH5-211ENST00000463144 PPP4R3AQ6IN85 833 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 OGFOD1Q8N543 542 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 RASSF8Q8NHQ8 419 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 P2RX7Q99572 595 aaKnown RBP11.47□□□□□ -0.57
MSH5-211ENST00000463144 PIM2Q9P1W9 311 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 CTNND2Q9UQB3 1225 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 PCDHA1Q9Y5I3 950 aa11.47□□□□□ -0.57
MSH5-211ENST00000463144 PRCPP42785 496 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 ECE1P42892 770 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 FXR2P51116 673 aaKnown RBP eCLIP11.46□□□□□ -0.57
MSH5-211ENST00000463144 TGFB2P61812 414 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 TBX2Q13207 712 aaPredicted RBP11.46□□□□□ -0.57
MSH5-211ENST00000463144 NR1I3Q14994 352 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 NIM1KQ8IY84 436 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 CCDC150Q8NCX0 1101 aa11.46□□□□□ -0.57
MSH5-211ENST00000463144 ZBED3Q96IU2 234 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms