RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 KIF5BP33176 963 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 CACNB2Q08289 660 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 GRM4Q14833 912 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 ANKRD1Q15327 319 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 RAB11FIP4Q86YS3 637 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 ADGRF4Q8IZF3 695 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 ANKRD35Q8N283 1001 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 CTCFLQ8NI51 663 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 BRF1Q92994 677 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 DDX11Q96FC9 970 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 ACAD9Q9H845 621 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 SLC5A4Q9NY91 659 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 MAD2L2Q9UI95 211 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 TPCN1Q9ULQ1 816 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
TRAPPC12-214ENST00000462983 ST18O60284 1047 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 DDAH1O94760 285 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 RXRAP19793 462 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 CYP2C19P33261 490 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 MCM2P49736 904 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 GNAQP50148 359 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 APOBRQ0VD83 1088 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 TROAPQ12815 778 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 CDC37Q16543 378 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 TKFCQ3LXA3 575 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 USH1GQ495M9 461 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 MFSD14CQ5VZR4 134 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 ZNF654Q8IZM8 581 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 ZNF274Q96GC6 653 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 MAML3Q96JK9 1138 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 DEFB118Q96PH6 123 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 MAP3K14Q99558 947 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 HMX1Q9NP08 348 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 FBXO40Q9UH90 709 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 PNMA2Q9UL42 364 aa10.64□□□□□ -0.71
TRAPPC12-214ENST00000462983 RPTORQ8N122 1335 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 KIAA1217Q5T5P2 1943 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 PALM3A6NDB9 673 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 GJB1P08034 283 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 PDIA3P30101 505 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 CCND3P30281 292 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 CNTN2Q02246 1040 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 CUL4AQ13619 759 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 ME3Q16798 604 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 QRICH1Q2TAL8 776 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 ZNF792Q3KQV3 632 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 MAP3K21Q5TCX8 1036 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 OLFML2BQ68BL8 750 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 NSMFQ6X4W1 530 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 JMJD4Q9H9V9 463 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 A1CFQ9NQ94 594 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 MKI67P46013 3256 aaKnown RBP10.63□□□□□ -0.71
TRAPPC12-214ENST00000462983 MYH7BA7E2Y1 1941 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 LRRC37A2A6NM11 1700 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 DNAJC25-GNG10A0A024R161 153 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 KLF18A0A0U1RQI7 1052 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 K7ELQ4 463 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 NFIBO00712 420 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 CNGA1P29973 690 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 SLC35G1Q2M3R5 365 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 PRAMEF19Q5SWL8 479 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 HOMER1Q86YM7 354 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 TRPV1Q8NER1 839 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 U2AF1L4Q8WU68 220 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 PIBF1Q8WXW3 757 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 SHISA4Q96DD7 197 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 TMX3Q96JJ7 454 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 LARP6Q9BRS8 491 aaKnown RBP10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 PAK6Q9NQU5 681 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 SH2B1Q9NRF2 756 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 ALPK3Q96L96 1907 aa10.62□□□□□ -0.71
TRAPPC12-214ENST00000462983 PFASO15067 1338 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 CCDC196A0A1B0GTZ2 297 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 PTPDC1A2A3K4 754 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 ZBTB43O43298 467 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 CYTH3O43739 400 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 PFKFB2O60825 505 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 SGPL1O95470 568 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 IGHA2P01877 340 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 TFRCP02786 760 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 CYBAP13498 195 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 GJA8P48165 433 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 RGS19P49795 217 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 SCRN1Q12765 414 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 TRAF1Q13077 416 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 BAATQ14032 418 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 MICU3Q86XE3 530 aa10.61□□□□□ -0.71
TRAPPC12-214ENST00000462983 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms