RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 QRICH1Q2TAL8 776 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 CPLX2Q6PUV4 134 aaKnown RBP11.09□□□□□ -0.63
PKP4-208ENST00000462335 RNF207Q6ZRF8 634 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 NOL8Q76FK4 1167 aaKnown RBP11.09□□□□□ -0.63
PKP4-208ENST00000462335 RAB11FIP4Q86YS3 637 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 NPLOC4Q8TAT6 608 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 TRIB2Q92519 343 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 BRF1Q92994 677 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 CUL5Q93034 780 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 DEFB118Q96PH6 123 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 JMJD4Q9H9V9 463 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 PCDHA1Q9Y5I3 950 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 ZNFX1Q9P2E3 1918 aaKnown RBP11.09□□□□□ -0.63
PKP4-208ENST00000462335 PLXNB2O15031 1838 aa11.09□□□□□ -0.63
PKP4-208ENST00000462335 RLFQ13129 1914 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 PNMA6FA0A0J9YX94 578 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 CPLX1O14810 134 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 ZBTB5O15062 677 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 COBLO75128 1261 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 GJB1P08034 283 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 RXRAP19793 462 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 CYP2C19P33261 490 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 METAP2P50579 478 aaKnown RBP eCLIP11.08□□□□□ -0.64
PKP4-208ENST00000462335 ANAPC15P60006 121 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 EXOSC10Q01780 885 aaKnown RBP11.08□□□□□ -0.64
PKP4-208ENST00000462335 APOBRQ0VD83 1088 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 BAATQ14032 418 aaPredicted RBP11.08□□□□□ -0.64
PKP4-208ENST00000462335 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 MTFR1Q15390 333 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 OLFML2BQ68BL8 750 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 SGMS1Q86VZ5 419 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 MSL3Q8N5Y2 521 aaKnown RBP11.08□□□□□ -0.64
PKP4-208ENST00000462335 USP6NLQ92738 828 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 KCNB2Q92953 911 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 MAML3Q96JK9 1138 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 TINF2Q9BSI4 451 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 TM6SF1Q9BZW5 370 aa11.08□□□□□ -0.64
PKP4-208ENST00000462335 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.08□□□□□ -0.64
PKP4-208ENST00000462335 MSCO60682 206 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 CFBP00751 764 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 KCNA4P22459 653 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 SMARCA1P28370 1054 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 CACNB2Q08289 660 aaPredicted RBP11.07□□□□□ -0.64
PKP4-208ENST00000462335 PDE4DQ08499 809 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 MUM1L1Q5H9M0 696 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 APOA5Q6Q788 366 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 PIGSQ96S52 555 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 UPF3BQ9BZI7 483 aaKnown RBP11.07□□□□□ -0.64
PKP4-208ENST00000462335 SPC25Q9HBM1 224 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 ZSWIM6Q9HCJ5 1215 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 A1CFQ9NQ94 594 aaKnown RBP11.07□□□□□ -0.64
PKP4-208ENST00000462335 ZHX1Q9UKY1 873 aaPredicted RBP11.07□□□□□ -0.64
PKP4-208ENST00000462335 MYH6P13533 1939 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 PARP14Q460N5 1801 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 ZNF536O15090 1300 aa11.07□□□□□ -0.64
PKP4-208ENST00000462335 SGPL1O95470 568 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
PKP4-208ENST00000462335 MLLT1Q03111 559 aaPredicted RBP11.06□□□□□ -0.64
PKP4-208ENST00000462335 TRIM32Q13049 653 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 ZNF792Q3KQV3 632 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 HEATR3Q7Z4Q2 680 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 ZNF467Q7Z7K2 595 aaPredicted RBP11.06□□□□□ -0.64
PKP4-208ENST00000462335 TRIM22Q8IYM9 498 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 ARRDC4Q8NCT1 418 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 U2AF1L4Q8WU68 220 aaKnown RBP11.06□□□□□ -0.64
PKP4-208ENST00000462335 SPZ1Q9BXG8 430 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 RIOX1Q9H6W3 641 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 CYP39A1Q9NYL5 469 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 FAM184BQ9ULE4 1060 aa11.06□□□□□ -0.64
PKP4-208ENST00000462335 A0A0G2JMZ2 1700 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 POTEFA5A3E0 1075 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 GCOM1H8Y6P7 765 aaPredicted RBP11.05□□□□□ -0.64
PKP4-208ENST00000462335 NFIBO00712 420 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 POLR2MP0CAP2 368 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 RARBP10826 455 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
PKP4-208ENST00000462335 GJA8P48165 433 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 NEK4P51957 841 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 CCT2P78371 535 aaKnown RBP11.05□□□□□ -0.64
PKP4-208ENST00000462335 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 PRAMEF19Q5SWL8 479 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 ARHGEF16Q5VV41 709 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
PKP4-208ENST00000462335 RGS22Q8NE09 1264 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 SMARCC2Q8TAQ2 1214 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 MAF1Q9H063 256 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
PKP4-208ENST00000462335 ABHD16BQ9H3Z7 469 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 FLRT1Q9NZU1 646 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 RBM27Q9P2N5 1060 aaKnown RBP11.05□□□□□ -0.64
PKP4-208ENST00000462335 NRBP1Q9UHY1 535 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 BRPF3Q9ULD4 1205 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
PKP4-208ENST00000462335 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
PKP4-208ENST00000462335 BAZ2BQ9UIF8 2168 aaKnown RBP11.04□□□□□ -0.64
PKP4-208ENST00000462335 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
PKP4-208ENST00000462335 CDKL5O76039 1030 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms