RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 RRP36Q96EU6 259 aaKnown RBP20.6■□□□□ 0.89
HPS3-204ENST00000462030 NUP58Q9BVL2 599 aa20.6■□□□□ 0.89
HPS3-204ENST00000462030 HSPA2P54652 639 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 KIF5AQ12840 1032 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 INF2Q27J81 1249 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 MIIPQ5JXC2 388 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 ANKRD40Q6AI12 368 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 CREG2Q8IUH2 290 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 DRC1Q96MC2 740 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 FAM184BQ9ULE4 1060 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 MYH10P35580 1976 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 LAMB1P07942 1786 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 CCDC194A0A1B0GVG4 234 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 GOLGA6CA6NDK9 693 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 GOLGA6DP0CG33 693 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 STAG2Q8N3U4 1231 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 NOC3LQ8WTT2 800 aaKnown RBP20.59■□□□□ 0.89
HPS3-204ENST00000462030 P2RX5Q93086 422 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 DHTKD1Q96HY7 919 aaPredicted RBP20.59■□□□□ 0.89
HPS3-204ENST00000462030 DCP1AQ9NPI6 582 aaPredicted RBP20.59■□□□□ 0.89
HPS3-204ENST00000462030 GOLGA6AQ9NYA3 693 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 DMGDHQ9UI17 866 aaKnown RBP20.59■□□□□ 0.89
HPS3-204ENST00000462030 SNX12Q9UMY4 172 aa20.59■□□□□ 0.89
HPS3-204ENST00000462030 XIRP1Q702N8 1843 aaKnown RBP20.58■□□□□ 0.89
HPS3-204ENST00000462030 TSPY2A6NKD2 308 aa20.58■□□□□ 0.89
HPS3-204ENST00000462030 NUTM2BA6NNL0 878 aaPredicted RBP20.58■□□□□ 0.89
HPS3-204ENST00000462030 NUTM2EB1AL46 878 aaPredicted RBP20.58■□□□□ 0.89
HPS3-204ENST00000462030 M0R2N6 131 aa20.58■□□□□ 0.89
HPS3-204ENST00000462030 MTIF2P46199 727 aaKnown RBP20.58■□□□□ 0.89
HPS3-204ENST00000462030 DNAJC21Q5F1R6 531 aaKnown RBP20.58■□□□□ 0.89
HPS3-204ENST00000462030 SND1Q7KZF4 910 aaKnown RBP eCLIP20.58■□□□□ 0.89
HPS3-204ENST00000462030 RETREG2Q8NC44 543 aa20.58■□□□□ 0.89
HPS3-204ENST00000462030 LRRC1Q9BTT6 524 aa20.58■□□□□ 0.89
HPS3-204ENST00000462030 NOC4LQ9BVI4 516 aaKnown RBP20.58■□□□□ 0.89
HPS3-204ENST00000462030 EHD4Q9H223 541 aa20.58■□□□□ 0.89
HPS3-204ENST00000462030 MLXIPQ9HAP2 919 aa20.58■□□□□ 0.89
HPS3-204ENST00000462030 CCNE1P24864 410 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 STK4Q13043 487 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 CCDC96Q2M329 555 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 CCDC178Q5BJE1 867 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 CCSER1Q9C0I3 900 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 PCDHA6Q9UN73 950 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 NIP7Q9Y221 180 aaKnown RBP eCLIP20.58■□□□□ 0.88
HPS3-204ENST00000462030 PCDHA8Q9Y5H6 950 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 SCN7AQ01118 1682 aa20.58■□□□□ 0.88
HPS3-204ENST00000462030 FCER1AP12319 257 aa20.57■□□□□ 0.88
HPS3-204ENST00000462030 IQCEQ6IPM2 695 aa20.57■□□□□ 0.88
HPS3-204ENST00000462030 INTS5Q6P9B9 1019 aaKnown RBP20.57■□□□□ 0.88
HPS3-204ENST00000462030 GPIHBP1Q8IV16 184 aa20.57■□□□□ 0.88
HPS3-204ENST00000462030 FNBP4Q8N3X1 1017 aaPredicted RBP20.57■□□□□ 0.88
HPS3-204ENST00000462030 PPM1EQ8WY54 764 aa20.57■□□□□ 0.88
HPS3-204ENST00000462030 SMARCAL1Q9NZC9 954 aa20.57■□□□□ 0.88
HPS3-204ENST00000462030 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 MYL1P05976 194 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 PLCG1P19174 1290 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 KIF5BP33176 963 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 PDE4DQ08499 809 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 MMGT1Q8N4V1 131 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 NSUN4Q96CB9 384 aaKnown RBP20.56■□□□□ 0.88
HPS3-204ENST00000462030 CCDC42Q96M95 316 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 FLT1P17948 1338 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 MOCS3O95396 460 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 EHD2Q9NZN4 543 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 LAMB2P55268 1798 aa20.56■□□□□ 0.88
HPS3-204ENST00000462030 IRAK1P51617 712 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 SLC7A5Q01650 507 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 MECOMQ03112 1051 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 SPA17Q15506 151 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 PARP10Q53GL7 1025 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 HPS3Q969F9 1004 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 FAM84BQ96KN1 310 aaPredicted RBP20.55■□□□□ 0.88
HPS3-204ENST00000462030 ERGIC2Q96RQ1 377 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 PSMB7Q99436 277 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 TSGA10Q9BZW7 698 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 RABEP2Q9H5N1 569 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 ARHGAP20Q9P2F6 1191 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 JRKLQ9Y4A0 524 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 KIAA1551Q9HCM1 1747 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 EPHB6O15197 1021 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 MATR3P43243 847 aaKnown RBP eCLIP20.55■□□□□ 0.88
HPS3-204ENST00000462030 CCT5P48643 541 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 CDK17Q00537 523 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 CCDC70Q6NSX1 233 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 NFRKBQ6P4R8 1299 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 C3orf67Q6ZVT6 689 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 AMOTL1Q8IY63 956 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 TRIM58Q8NG06 486 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 IFIH1Q9BYX4 1025 aaKnown RBP20.55■□□□□ 0.88
HPS3-204ENST00000462030 TRIM9Q9C026 710 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 SH3GLB2Q9NR46 395 aa20.55■□□□□ 0.88
HPS3-204ENST00000462030 BICDL2A1A5D9 508 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 CAVIN4Q5BKX8 364 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 ZSCAN29Q8IWY8 852 aaPredicted RBP20.54■□□□□ 0.88
HPS3-204ENST00000462030 EFCAB13Q8IY85 973 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 SPATA4Q8NEY3 305 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 BTG4Q9NY30 223 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 A0A1W2PQJ5 194 aa20.54■□□□□ 0.88
HPS3-204ENST00000462030 TACC1O75410 805 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms