RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 WWC2Q6AWC2 1192 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 TC2NQ8N9U0 490 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 SMARCE1Q969G3 411 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 TRIM34Q9BYJ4 488 aa14.08□□□□□ -0.16
COL4A6-204ENST00000461897 WNT10BO00744 389 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 FOXN1O15353 648 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 ATP8B1O43520 1251 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 FMR1Q06787 632 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL4A6-204ENST00000461897 RRP1BQ14684 758 aaKnown RBP14.07□□□□□ -0.16
COL4A6-204ENST00000461897 NOM1Q5C9Z4 860 aaKnown RBP14.07□□□□□ -0.16
COL4A6-204ENST00000461897 FAM151AQ8WW52 585 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 BAG1Q99933 345 aaPredicted RBP14.07□□□□□ -0.16
COL4A6-204ENST00000461897 CABP5Q9NP86 173 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 SERTAD1Q9UHV2 236 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 NFE2L3Q9Y4A8 694 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 FHOD1Q9Y613 1164 aa14.07□□□□□ -0.16
COL4A6-204ENST00000461897 FRMPD2Q68DX3 1309 aaPredicted RBP14.07□□□□□ -0.16
COL4A6-204ENST00000461897 A0A1B0GTH6 734 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 STXBP3O00186 592 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 POLR2DO15514 142 aaKnown RBP14.06□□□□□ -0.16
COL4A6-204ENST00000461897 GDF11O95390 407 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 SMARCA1P28370 1054 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 NLRP5P59047 1200 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 JAG1P78504 1218 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 GRIN1Q05586 938 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 NR1I3Q14994 352 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 TNIP1Q15025 636 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 NBPF9Q3BBW0 867 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 ARHGAP29Q52LW3 1261 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 ASPRV1Q53RT3 343 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 FKBP1CQ5VVH2 108 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 SH3RF1Q7Z6J0 888 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 MED15Q96RN5 788 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 VEZTQ9HBM0 779 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 BRMS1Q9HCU9 246 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 MYOZ2Q9NPC6 264 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 PCDHB6Q9Y5E3 794 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 FZD9O00144 591 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 BMP15O95972 392 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 EGFRP00533 1210 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
COL4A6-204ENST00000461897 ZNF280AP59817 542 aaPredicted RBP14.06□□□□□ -0.16
COL4A6-204ENST00000461897 MAP3K9P80192 1104 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 SEPT2Q15019 361 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 TMEM179Q6ZVK1 233 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 HEATR3Q7Z4Q2 680 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 SIAH1Q8IUQ4 282 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 UBXN4Q92575 508 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 UBA5Q9GZZ9 404 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 RIOX1Q9H6W3 641 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 KANSL2Q9H9L4 492 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 ARGLU1Q9NWB6 273 aaPredicted RBP14.06□□□□□ -0.16
COL4A6-204ENST00000461897 BARHL2Q9NY43 387 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 NYAP2Q9P242 653 aa14.06□□□□□ -0.16
COL4A6-204ENST00000461897 HERC5Q9UII4 1024 aaKnown RBP14.06□□□□□ -0.16
COL4A6-204ENST00000461897 WNT7AO00755 349 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 RPS12P25398 132 aaKnown RBP14.05□□□□□ -0.16
COL4A6-204ENST00000461897 ZNF543Q08ER8 600 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 ABCB5Q2M3G0 1257 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 TAF3Q5VWG9 929 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 APTXQ7Z2E3 356 aaKnown RBP14.05□□□□□ -0.16
COL4A6-204ENST00000461897 MKL1Q969V6 931 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 PANX2Q96RD6 677 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 TMEM39BQ9GZU3 492 aa14.05□□□□□ -0.16
COL4A6-204ENST00000461897 M0R2N6 131 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 CALML3P27482 149 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 ICA1Q05084 483 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 SPECC1Q5M775 1068 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 FAM83AQ86UY5 434 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 RRP36Q96EU6 259 aaKnown RBP14.04□□□□□ -0.16
COL4A6-204ENST00000461897 PIGSQ96S52 555 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL4A6-204ENST00000461897 SPON1Q9HCB6 807 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 PGAP2Q9UHJ9 254 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 PCDHA4Q9UN74 947 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 ZNF541Q9H0D2 1346 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 GH2P01242 217 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 PNMA6AP0CW24 399 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-204ENST00000461897 ATP2B1P20020 1258 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 PBX1P40424 430 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 GMPSP49915 693 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-204ENST00000461897 BLIDQ8IZY5 108 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 MNS1Q8NEH6 495 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 CCDC148Q8NFR7 591 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 NAA15Q9BXJ9 866 aaKnown RBP14.04□□□□□ -0.16
COL4A6-204ENST00000461897 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
COL4A6-204ENST00000461897 DICER1Q9UPY3 1922 aaKnown RBP14.03□□□□□ -0.16
COL4A6-204ENST00000461897 TRIM75PA6NK02 468 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 URI1O94763 535 aaPredicted RBP14.03□□□□□ -0.16
COL4A6-204ENST00000461897 FECHP22830 423 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 GOLGA8FQ08AF8 430 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 GOLGA8DPQ0D2H9 430 aa14.03□□□□□ -0.16
COL4A6-204ENST00000461897 CUL4BQ13620 913 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms