RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 TAF6LQ9Y6J9 622 aa17.99■□□□□ 0.47
VARS-219ENST00000461328 DHX16O60231 1041 aaKnown RBP17.98■□□□□ 0.47
VARS-219ENST00000461328 ADCYAP1R1P41586 468 aa17.98■□□□□ 0.47
VARS-219ENST00000461328 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
VARS-219ENST00000461328 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
VARS-219ENST00000461328 ANKS1AQ92625 1134 aa17.98■□□□□ 0.47
VARS-219ENST00000461328 CYP39A1Q9NYL5 469 aa17.98■□□□□ 0.47
VARS-219ENST00000461328 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
VARS-219ENST00000461328 PARP1P09874 1014 aaKnown RBP17.97■□□□□ 0.47
VARS-219ENST00000461328 FXR1P51114 621 aaKnown RBP eCLIP17.97■□□□□ 0.47
VARS-219ENST00000461328 RTP1P59025 263 aa17.97■□□□□ 0.47
VARS-219ENST00000461328 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
VARS-219ENST00000461328 CHST3Q7LGC8 479 aa17.97■□□□□ 0.47
VARS-219ENST00000461328 FERMT2Q96AC1 680 aa17.97■□□□□ 0.47
VARS-219ENST00000461328 ASB14A6NK59 587 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 SLC27A2O14975 620 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 WTAPQ15007 396 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 SEC23AQ15436 765 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 CCDC144BQ3MJ40 725 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 RNF20Q5VTR2 975 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 SLC39A5Q6ZMH5 540 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 GDF15Q99988 308 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 UBA5Q9GZZ9 404 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 CPVLQ9H3G5 476 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 PHF24Q9UPV7 400 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 ATP11BQ9Y2G3 1177 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 SMCHD1A6NHR9 2005 aa17.96■□□□□ 0.47
VARS-219ENST00000461328 SYNRGQ9UMZ2 1314 aa17.96■□□□□ 0.46
VARS-219ENST00000461328 NFIBO00712 420 aa17.95■□□□□ 0.46
VARS-219ENST00000461328 ADAMTS4O75173 837 aa17.95■□□□□ 0.46
VARS-219ENST00000461328 DUSP11O75319 330 aaKnown RBP17.95■□□□□ 0.46
VARS-219ENST00000461328 MAGEA10P43363 369 aaPredicted RBP17.95■□□□□ 0.46
VARS-219ENST00000461328 BAATQ14032 418 aaPredicted RBP17.95■□□□□ 0.46
VARS-219ENST00000461328 CREB3L3Q68CJ9 461 aa17.95■□□□□ 0.46
VARS-219ENST00000461328 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
VARS-219ENST00000461328 TRIOBPQ9H2D6 2365 aa17.94■□□□□ 0.46
VARS-219ENST00000461328 A0A1W2PPC1 479 aa17.94■□□□□ 0.46
VARS-219ENST00000461328 PTPDC1A2A3K4 754 aa17.94■□□□□ 0.46
VARS-219ENST00000461328 CDC37Q16543 378 aaPredicted RBP17.94■□□□□ 0.46
VARS-219ENST00000461328 MB21D2Q8IYB1 491 aaPredicted RBP17.94■□□□□ 0.46
VARS-219ENST00000461328 PURBQ96QR8 312 aaKnown RBP17.94■□□□□ 0.46
VARS-219ENST00000461328 SPC25Q9HBM1 224 aa17.94■□□□□ 0.46
VARS-219ENST00000461328 PRKAG2Q9UGJ0 569 aa17.94■□□□□ 0.46
VARS-219ENST00000461328 ASTN1O14525 1302 aa17.94■□□□□ 0.46
VARS-219ENST00000461328 MCM3APO60318 1980 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 A0A1W2PQ45 241 aaPredicted RBP17.93■□□□□ 0.46
VARS-219ENST00000461328 A0A1W2PQY0 241 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 PRC1O43663 620 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 CALML3P27482 149 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 BMP8BP34820 402 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 SNX17Q15036 470 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 USH1GQ495M9 461 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 TRIM60Q495X7 471 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 RNF207Q6ZRF8 634 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 NOL8Q76FK4 1167 aaKnown RBP17.93■□□□□ 0.46
VARS-219ENST00000461328 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 CLEC4DQ8WXI8 215 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 LBHD1Q9BQE6 289 aaPredicted RBP17.93■□□□□ 0.46
VARS-219ENST00000461328 TSEN34Q9BSV6 310 aaKnown RBP17.93■□□□□ 0.46
VARS-219ENST00000461328 KATNBL1Q9H079 304 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 PCDH10Q9P2E7 1040 aa17.93■□□□□ 0.46
VARS-219ENST00000461328 ADD3Q9UEY8 706 aaKnown RBP17.93■□□□□ 0.46
VARS-219ENST00000461328 ADCY6O43306 1168 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 C6orf222P0C671 652 aaPredicted RBP17.92■□□□□ 0.46
VARS-219ENST00000461328 MCM5P33992 734 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 ACLYP53396 1101 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 ANTXR2P58335 489 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 MDM2Q00987 491 aaPredicted RBP17.92■□□□□ 0.46
VARS-219ENST00000461328 TNFAIP2Q03169 654 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 NECTIN1Q15223 517 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 SLC30A10Q6XR72 485 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 NFXL1Q6ZNB6 911 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 EEPD1Q7L9B9 569 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 ADGRF4Q8IZF3 695 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 KLHDC9Q8NEP7 349 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 UBE2OQ9C0C9 1292 aaKnown RBP17.92■□□□□ 0.46
VARS-219ENST00000461328 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 PRDM5Q9NQX1 630 aaPredicted RBP17.92■□□□□ 0.46
VARS-219ENST00000461328 DDX49Q9Y6V7 483 aaKnown RBP17.92■□□□□ 0.46
VARS-219ENST00000461328 DNAH12Q6ZR08 3092 aa17.92■□□□□ 0.46
VARS-219ENST00000461328 ALDH5A1P51649 535 aaPredicted RBP17.91■□□□□ 0.46
VARS-219ENST00000461328 KCNA10Q16322 511 aa17.91■□□□□ 0.46
VARS-219ENST00000461328 FBXO16Q8IX29 292 aaPredicted RBP17.91■□□□□ 0.46
VARS-219ENST00000461328 NUP133Q8WUM0 1156 aa17.91■□□□□ 0.46
VARS-219ENST00000461328 SENP2Q9HC62 589 aa17.91■□□□□ 0.46
VARS-219ENST00000461328 STARD7Q9NQZ5 370 aa17.91■□□□□ 0.46
VARS-219ENST00000461328 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.9■□□□□ 0.46
VARS-219ENST00000461328 MYADML2A6NDP7 307 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 MOXD2PA6NHM9 499 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 CST5P28325 142 aaPredicted RBP17.9■□□□□ 0.46
VARS-219ENST00000461328 GJA9P57773 515 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 RPS6P62753 249 aaKnown RBP17.9■□□□□ 0.46
VARS-219ENST00000461328 GRM4Q14833 912 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 GNASQ5JWF2 1037 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 C1orf53Q5VUE5 145 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 STAG2Q8N3U4 1231 aa17.9■□□□□ 0.46
VARS-219ENST00000461328 PCSK9Q8NBP7 692 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms