RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 SOX1O00570 391 aaPredicted RBP24.5■■□□□ 1.51
SRM-202ENST00000459997 GOLGA8HP0CJ92 632 aa24.5■■□□□ 1.51
SRM-202ENST00000459997 CHMLP26374 656 aa24.5■■□□□ 1.51
SRM-202ENST00000459997 GPATCH4Q5T3I0 446 aaKnown RBP24.5■■□□□ 1.51
SRM-202ENST00000459997 C1orf53Q5VUE5 145 aa24.5■■□□□ 1.51
SRM-202ENST00000459997 TDHQ8IZJ6 230 aa24.5■■□□□ 1.51
SRM-202ENST00000459997 TSEN34Q9BSV6 310 aaKnown RBP24.5■■□□□ 1.51
SRM-202ENST00000459997 PRDM5Q9NQX1 630 aaPredicted RBP24.5■■□□□ 1.51
SRM-202ENST00000459997 ZSWIM5Q9P217 1185 aa24.5■■□□□ 1.51
SRM-202ENST00000459997 ASTN1O14525 1302 aa24.5■■□□□ 1.51
SRM-202ENST00000459997 LTBP2Q14767 1821 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 LCTP09848 1927 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 NFIBO00712 420 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 ACLYP53396 1101 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 ENAHQ8N8S7 591 aaPredicted RBP24.49■■□□□ 1.51
SRM-202ENST00000459997 KLHDC9Q8NEP7 349 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 ANKS1AQ92625 1134 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 SPC25Q9HBM1 224 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 DDX49Q9Y6V7 483 aaKnown RBP24.49■■□□□ 1.51
SRM-202ENST00000459997 TNKSO95271 1327 aa24.49■■□□□ 1.51
SRM-202ENST00000459997 SZT2Q5T011 3432 aa24.48■■□□□ 1.51
SRM-202ENST00000459997 MYADML2A6NDP7 307 aa24.48■■□□□ 1.51
SRM-202ENST00000459997 C6orf222P0C671 652 aaPredicted RBP24.48■■□□□ 1.51
SRM-202ENST00000459997 BAATQ14032 418 aaPredicted RBP24.48■■□□□ 1.51
SRM-202ENST00000459997 KCNA10Q16322 511 aa24.48■■□□□ 1.51
SRM-202ENST00000459997 PURBQ96QR8 312 aaKnown RBP24.48■■□□□ 1.51
SRM-202ENST00000459997 UBAC1Q9BSL1 405 aa24.48■■□□□ 1.51
SRM-202ENST00000459997 PNMA2Q9UL42 364 aa24.48■■□□□ 1.51
SRM-202ENST00000459997 MOXD2PA6NHM9 499 aa24.47■■□□□ 1.51
SRM-202ENST00000459997 IRX5P78411 483 aaPredicted RBP24.47■■□□□ 1.51
SRM-202ENST00000459997 TLE2Q04725 743 aa24.47■■□□□ 1.51
SRM-202ENST00000459997 CCSAPQ6IQ19 270 aaPredicted RBP24.47■■□□□ 1.51
SRM-202ENST00000459997 NUP133Q8WUM0 1156 aa24.47■■□□□ 1.51
SRM-202ENST00000459997 LRCH3Q96II8 777 aa24.47■■□□□ 1.51
SRM-202ENST00000459997 UPF3AQ9H1J1 476 aaKnown RBP24.47■■□□□ 1.51
SRM-202ENST00000459997 CPVLQ9H3G5 476 aa24.47■■□□□ 1.51
SRM-202ENST00000459997 PDLIM7Q9NR12 457 aa24.47■■□□□ 1.51
SRM-202ENST00000459997 WDR19Q8NEZ3 1342 aa24.46■■□□□ 1.51
SRM-202ENST00000459997 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.46■■□□□ 1.51
SRM-202ENST00000459997 PTPDC1A2A3K4 754 aa24.46■■□□□ 1.51
SRM-202ENST00000459997 CST5P28325 142 aaPredicted RBP24.46■■□□□ 1.51
SRM-202ENST00000459997 GJA9P57773 515 aa24.46■■□□□ 1.51
SRM-202ENST00000459997 TNFAIP2Q03169 654 aa24.46■■□□□ 1.51
SRM-202ENST00000459997 NOL8Q76FK4 1167 aaKnown RBP24.46■■□□□ 1.51
SRM-202ENST00000459997 UBA5Q9GZZ9 404 aa24.46■■□□□ 1.51
SRM-202ENST00000459997 STARD7Q9NQZ5 370 aa24.46■■□□□ 1.51
SRM-202ENST00000459997 PTH1RQ03431 593 aa24.45■■□□□ 1.5
SRM-202ENST00000459997 ASPRV1Q53RT3 343 aa24.45■■□□□ 1.5
SRM-202ENST00000459997 EEPD1Q7L9B9 569 aa24.45■■□□□ 1.5
SRM-202ENST00000459997 PCSK9Q8NBP7 692 aaKnown RBP24.45■■□□□ 1.5
SRM-202ENST00000459997 CLEC4DQ8WXI8 215 aa24.45■■□□□ 1.5
SRM-202ENST00000459997 ADD3Q9UEY8 706 aaKnown RBP24.45■■□□□ 1.5
SRM-202ENST00000459997 LAMA3Q16787 3333 aa24.45■■□□□ 1.5
SRM-202ENST00000459997 PQBP1O60828 265 aaKnown RBP24.44■■□□□ 1.5
SRM-202ENST00000459997 CALML3P27482 149 aa24.44■■□□□ 1.5
SRM-202ENST00000459997 LRIT3Q3SXY7 679 aa24.44■■□□□ 1.5
SRM-202ENST00000459997 GNASQ5JWF2 1037 aa24.44■■□□□ 1.5
SRM-202ENST00000459997 SLC30A10Q6XR72 485 aa24.44■■□□□ 1.5
SRM-202ENST00000459997 SH3RF1Q7Z6J0 888 aa24.44■■□□□ 1.5
SRM-202ENST00000459997 FBXO16Q8IX29 292 aaPredicted RBP24.44■■□□□ 1.5
SRM-202ENST00000459997 U3KPZ7 1027 aaPredicted RBP24.44■■□□□ 1.5
SRM-202ENST00000459997 TRIM43BA6NCK2 446 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 SGSM2O43147 1006 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 ASGR1P07306 291 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 CLTBP09497 229 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 PARP1P09874 1014 aaKnown RBP24.43■■□□□ 1.5
SRM-202ENST00000459997 ALDH5A1P51649 535 aaPredicted RBP24.43■■□□□ 1.5
SRM-202ENST00000459997 TRDNQ13061 729 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 USH1GQ495M9 461 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 IFIT1BQ5T764 474 aaKnown RBP24.43■■□□□ 1.5
SRM-202ENST00000459997 RNF207Q6ZRF8 634 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 CYB5R4Q7L1T6 521 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 MORC4Q8TE76 937 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 TRIM43Q96BQ3 446 aaPredicted RBP24.43■■□□□ 1.5
SRM-202ENST00000459997 GLT1D1Q96MS3 346 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 PDGFCQ9NRA1 345 aa24.43■■□□□ 1.5
SRM-202ENST00000459997 CYP21A2P08686 494 aa24.42■■□□□ 1.5
SRM-202ENST00000459997 CDC37Q16543 378 aaPredicted RBP24.42■■□□□ 1.5
SRM-202ENST00000459997 TAPT1Q6NXT6 567 aa24.42■■□□□ 1.5
SRM-202ENST00000459997 TLK2Q86UE8 772 aa24.42■■□□□ 1.5
SRM-202ENST00000459997 ADGRF4Q8IZF3 695 aa24.42■■□□□ 1.5
SRM-202ENST00000459997 BADQ92934 168 aa24.42■■□□□ 1.5
SRM-202ENST00000459997 VTA1Q9NP79 307 aa24.42■■□□□ 1.5
SRM-202ENST00000459997 CTAGE5O15320 804 aa24.41■■□□□ 1.5
SRM-202ENST00000459997 DHX16O60231 1041 aaKnown RBP24.41■■□□□ 1.5
SRM-202ENST00000459997 SMPD1P17405 629 aa24.41■■□□□ 1.5
SRM-202ENST00000459997 RPS6P62753 249 aaKnown RBP24.41■■□□□ 1.5
SRM-202ENST00000459997 BEX3Q00994 111 aa24.41■■□□□ 1.5
SRM-202ENST00000459997 ANKRD33Q7Z3H0 272 aa24.41■■□□□ 1.5
SRM-202ENST00000459997 VTI1AQ96AJ9 217 aa24.41■■□□□ 1.5
SRM-202ENST00000459997 GNEQ9Y223 722 aaKnown RBP24.41■■□□□ 1.5
SRM-202ENST00000459997 ELP1O95163 1332 aa24.4■■□□□ 1.5
SRM-202ENST00000459997 LOC102724159A0A0B4J2E5 919 aa24.4■■□□□ 1.5
SRM-202ENST00000459997 NKX3-2P78367 333 aa24.4■■□□□ 1.5
SRM-202ENST00000459997 PWP2Q15269 919 aaKnown RBP24.4■■□□□ 1.5
SRM-202ENST00000459997 SEC23AQ15436 765 aa24.4■■□□□ 1.5
SRM-202ENST00000459997 IQSEC1Q6DN90 963 aa24.4■■□□□ 1.5
SRM-202ENST00000459997 AP5M1Q9H0R1 490 aa24.4■■□□□ 1.5
SRM-202ENST00000459997 DCDC2CA8MYV0 355 aa24.39■■□□□ 1.49
SRM-202ENST00000459997 PTGS1P23219 599 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms