RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PNMA6FA0A0J9YX94 578 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 COBLO75128 1261 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 XRCC5P13010 732 aaKnown RBP16.39■□□□□ 0.21
SMPD4-215ENST00000457039 RABEP1Q15276 862 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 NTRK3Q16288 839 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 FBXO11Q86XK2 927 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 HOMER1Q86YM7 354 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 MMP19Q99542 508 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 AMNQ9BXJ7 453 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 ABCB11O95342 1321 aa16.39■□□□□ 0.21
SMPD4-215ENST00000457039 DNAJC25-GNG10A0A024R161 153 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 CCDC196A0A1B0GTZ2 297 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 NFIBO00712 420 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 IGHA2P01877 340 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 CYP2B6P20813 491 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 RGS2P41220 211 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 KCTD2Q14681 263 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 USH1GQ495M9 461 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 CCDC82Q8N4S0 544 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 NPLOC4Q8TAT6 608 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 RAET1EQ8TD07 263 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 RRP36Q96EU6 259 aaKnown RBP16.38■□□□□ 0.21
SMPD4-215ENST00000457039 APBA2Q99767 749 aa16.38■□□□□ 0.21
SMPD4-215ENST00000457039 A1CFQ9NQ94 594 aaKnown RBP16.38■□□□□ 0.21
SMPD4-215ENST00000457039 CENPFP49454 3210 aa16.37■□□□□ 0.21
SMPD4-215ENST00000457039 PFKFB2O60825 505 aa16.37■□□□□ 0.21
SMPD4-215ENST00000457039 CCT2P78371 535 aaKnown RBP16.37■□□□□ 0.21
SMPD4-215ENST00000457039 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
SMPD4-215ENST00000457039 OPLAHO14841 1288 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 ADCY3O60266 1144 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 LARGE1O95461 756 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 PGK2P07205 417 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 IFNAR1P17181 557 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 SCRN1Q12765 414 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 ME3Q16798 604 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 ZNF792Q3KQV3 632 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 SLAIN1Q8ND83 568 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 RGS22Q8NE09 1264 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 IL27Q8NEV9 243 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 PIBF1Q8WXW3 757 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 TRIB2Q92519 343 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 MAF1Q9H063 256 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 CYP39A1Q9NYL5 469 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
SMPD4-215ENST00000457039 MRPL11Q9Y3B7 192 aaKnown RBP16.36■□□□□ 0.21
SMPD4-215ENST00000457039 PCDHA1Q9Y5I3 950 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 MYH6P13533 1939 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 PFASO15067 1338 aa16.36■□□□□ 0.21
SMPD4-215ENST00000457039 ZNFX1Q9P2E3 1918 aaKnown RBP16.35■□□□□ 0.21
SMPD4-215ENST00000457039 hCG_1642624A0A1W2PR95 340 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 ELNP15502 786 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 GRK4P32298 578 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 GHRHRQ02643 423 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 TRAF1Q13077 416 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 STK3Q13188 491 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 CCL14Q16627 93 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 ARMC5Q96C12 935 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 FGD4Q96M96 766 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 SLKQ9H2G2 1235 aaPredicted RBP16.35■□□□□ 0.21
SMPD4-215ENST00000457039 FLRT1Q9NZU1 646 aa16.35■□□□□ 0.21
SMPD4-215ENST00000457039 SEC63Q9UGP8 760 aaKnown RBP16.35■□□□□ 0.21
SMPD4-215ENST00000457039 PRPF3O43395 683 aaKnown RBP16.34■□□□□ 0.21
SMPD4-215ENST00000457039 BAATQ14032 418 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-215ENST00000457039 OLFML2BQ68BL8 750 aa16.34■□□□□ 0.21
SMPD4-215ENST00000457039 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
SMPD4-215ENST00000457039 NOL8Q76FK4 1167 aaKnown RBP16.34■□□□□ 0.21
SMPD4-215ENST00000457039 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
SMPD4-215ENST00000457039 SH3TC2Q8TF17 1288 aa16.34■□□□□ 0.21
SMPD4-215ENST00000457039 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
SMPD4-215ENST00000457039 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
SMPD4-215ENST00000457039 MAML3Q96JK9 1138 aa16.34■□□□□ 0.21
SMPD4-215ENST00000457039 SLC5A4Q9NY91 659 aa16.34■□□□□ 0.21
SMPD4-215ENST00000457039 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-215ENST00000457039 LCTP09848 1927 aa16.33■□□□□ 0.21
SMPD4-215ENST00000457039 HMGCRP04035 888 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 RPS6P62753 249 aaKnown RBP16.33■□□□□ 0.2
SMPD4-215ENST00000457039 ST3GAL1Q11201 340 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 PKN1Q16512 942 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 SLC9C1Q4G0N8 1177 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 RNF207Q6ZRF8 634 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 ZNF467Q7Z7K2 595 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-215ENST00000457039 PHKBQ93100 1093 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 GTF3C6Q969F1 213 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-215ENST00000457039 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 ASTN1O14525 1302 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 PLXNA1Q9UIW2 1896 aa16.33■□□□□ 0.2
SMPD4-215ENST00000457039 SOWAHBA6NEL2 793 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 POTEB2H3BUK9 544 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 INHAP05111 366 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 HSD17B4P51659 736 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 CNTN2Q02246 1040 aa16.32■□□□□ 0.2
SMPD4-215ENST00000457039 TRIM32Q13049 653 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms