RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PALM3A6NDB9 673 aaPredicted RBP26.97■■□□□ 1.91
CBX3-204ENST00000456948 B4DLN1 442 aa26.97■■□□□ 1.91
CBX3-204ENST00000456948 HMGB1P09429 215 aaKnown RBP26.97■■□□□ 1.91
CBX3-204ENST00000456948 AKR1A1P14550 325 aa26.97■■□□□ 1.91
CBX3-204ENST00000456948 MRPL12P52815 198 aaKnown RBP26.97■■□□□ 1.91
CBX3-204ENST00000456948 GRM4Q14833 912 aa26.97■■□□□ 1.91
CBX3-204ENST00000456948 CTCFLQ8NI51 663 aaPredicted RBP26.97■■□□□ 1.91
CBX3-204ENST00000456948 MAP3K14Q99558 947 aa26.97■■□□□ 1.91
CBX3-204ENST00000456948 ABCB11O95342 1321 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 CALM1P0DP23 149 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 CALM2P0DP24 149 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 CALM3P0DP25 149 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 LIFRP42702 1097 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 ANTXR2P58335 489 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 TSGA10IPQ3SY00 556 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 USH1GQ495M9 461 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 SYNE3Q6ZMZ3 975 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 RNF207Q6ZRF8 634 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 FBXO11Q86XK2 927 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 MCF2L2Q86YR7 1114 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 NUP133Q8WUM0 1156 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 CPVLQ9H3G5 476 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.96■■□□□ 1.91
CBX3-204ENST00000456948 MAD2L2Q9UI95 211 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 FAM184BQ9ULE4 1060 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 MRPL11Q9Y3B7 192 aaKnown RBP26.96■■□□□ 1.91
CBX3-204ENST00000456948 NR2E3Q9Y5X4 410 aa26.96■■□□□ 1.91
CBX3-204ENST00000456948 LOC102724159A0A0B4J2E5 919 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 DDAH1O94760 285 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 GNAQP50148 359 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 CNTN2Q02246 1040 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 TROAPQ12815 778 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 BAATQ14032 418 aaPredicted RBP26.95■■□□□ 1.9
CBX3-204ENST00000456948 PWP2Q15269 919 aaKnown RBP26.95■■□□□ 1.9
CBX3-204ENST00000456948 RGS22Q8NE09 1264 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 JMJD4Q9H9V9 463 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 LY9Q9HBG7 655 aa26.95■■□□□ 1.9
CBX3-204ENST00000456948 ZHX1Q9UKY1 873 aaPredicted RBP26.95■■□□□ 1.9
CBX3-204ENST00000456948 KBTBD13C9JR72 458 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 DNM1LO00429 736 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 EPB41L2O43491 1005 aaKnown RBP26.94■■□□□ 1.9
CBX3-204ENST00000456948 ACVR2BQ13705 512 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 ARMCX2Q7L311 632 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 CCDC144CPQ8IYA2 1237 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 ZNF654Q8IZM8 581 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 STAG2Q8N3U4 1231 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 LZTS2Q9BRK4 669 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 AMNQ9BXJ7 453 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 SLC12A7Q9Y666 1083 aa26.94■■□□□ 1.9
CBX3-204ENST00000456948 H0YGN5 161 aa26.93■■□□□ 1.9
CBX3-204ENST00000456948 EVI5O60447 810 aa26.93■■□□□ 1.9
CBX3-204ENST00000456948 EIF5BO60841 1220 aaKnown RBP26.93■■□□□ 1.9
CBX3-204ENST00000456948 SNAI1O95863 264 aaPredicted RBP26.93■■□□□ 1.9
CBX3-204ENST00000456948 ZNF865P0CJ78 1059 aaPredicted RBP26.93■■□□□ 1.9
CBX3-204ENST00000456948 QRICH1Q2TAL8 776 aa26.93■■□□□ 1.9
CBX3-204ENST00000456948 DHX32Q7L7V1 743 aaKnown RBP26.93■■□□□ 1.9
CBX3-204ENST00000456948 NFIBO00712 420 aa26.92■■□□□ 1.9
CBX3-204ENST00000456948 SH2B2O14492 632 aaPredicted RBP26.92■■□□□ 1.9
CBX3-204ENST00000456948 ZBTB5O15062 677 aa26.92■■□□□ 1.9
CBX3-204ENST00000456948 MYCNP04198 464 aaPredicted RBP26.92■■□□□ 1.9
CBX3-204ENST00000456948 CALML3P27482 149 aa26.92■■□□□ 1.9
CBX3-204ENST00000456948 FGD1P98174 961 aa26.92■■□□□ 1.9
CBX3-204ENST00000456948 RNF180Q86T96 592 aa26.92■■□□□ 1.9
CBX3-204ENST00000456948 DIS3LQ8TF46 1054 aaKnown RBP26.92■■□□□ 1.9
CBX3-204ENST00000456948 CLEC4DQ8WXI8 215 aa26.92■■□□□ 1.9
CBX3-204ENST00000456948 SPC25Q9HBM1 224 aa26.92■■□□□ 1.9
CBX3-204ENST00000456948 SOWAHBA6NEL2 793 aa26.91■■□□□ 1.9
CBX3-204ENST00000456948 ANO1Q5XXA6 986 aa26.91■■□□□ 1.9
CBX3-204ENST00000456948 SENP2Q9HC62 589 aa26.91■■□□□ 1.9
CBX3-204ENST00000456948 XPNPEP3Q9NQH7 507 aa26.91■■□□□ 1.9
CBX3-204ENST00000456948 SMCHD1A6NHR9 2005 aa26.9■■□□□ 1.9
CBX3-204ENST00000456948 TAL1P17542 331 aaPredicted RBP26.9■■□□□ 1.9
CBX3-204ENST00000456948 SMARCA1P28370 1054 aa26.9■■□□□ 1.9
CBX3-204ENST00000456948 RPS6P62753 249 aaKnown RBP26.9■■□□□ 1.9
CBX3-204ENST00000456948 DNERQ8NFT8 737 aa26.9■■□□□ 1.9
CBX3-204ENST00000456948 RIOX1Q9H6W3 641 aa26.9■■□□□ 1.9
CBX3-204ENST00000456948 MYH6P13533 1939 aa26.9■■□□□ 1.9
CBX3-204ENST00000456948 HSPA4P34932 840 aa26.89■■□□□ 1.9
CBX3-204ENST00000456948 HOMER1Q86YM7 354 aa26.89■■□□□ 1.9
CBX3-204ENST00000456948 FGD4Q96M96 766 aa26.89■■□□□ 1.9
CBX3-204ENST00000456948 DUSP11O75319 330 aaKnown RBP26.88■■□□□ 1.89
CBX3-204ENST00000456948 PSMA5P28066 241 aa26.88■■□□□ 1.89
CBX3-204ENST00000456948 MNX1P50219 401 aaPredicted RBP26.88■■□□□ 1.89
CBX3-204ENST00000456948 RASEFQ8IZ41 740 aa26.88■■□□□ 1.89
CBX3-204ENST00000456948 SAMD3Q8N6K7 520 aa26.88■■□□□ 1.89
CBX3-204ENST00000456948 MTMR8Q96EF0 704 aa26.88■■□□□ 1.89
CBX3-204ENST00000456948 SENP6Q9GZR1 1112 aaPredicted RBP26.88■■□□□ 1.89
CBX3-204ENST00000456948 MAP3K20Q9NYL2 800 aaKnown RBP26.88■■□□□ 1.89
CBX3-204ENST00000456948 PCDHA1Q9Y5I3 950 aa26.88■■□□□ 1.89
CBX3-204ENST00000456948 PNMA6FA0A0J9YX94 578 aa26.87■■□□□ 1.89
CBX3-204ENST00000456948 COL6A1P12109 1028 aa26.87■■□□□ 1.89
CBX3-204ENST00000456948 CCDC144BQ3MJ40 725 aa26.87■■□□□ 1.89
CBX3-204ENST00000456948 GJC2Q5T442 439 aaPredicted RBP26.87■■□□□ 1.89
CBX3-204ENST00000456948 NOL8Q76FK4 1167 aaKnown RBP26.87■■□□□ 1.89
CBX3-204ENST00000456948 SGMS1Q86VZ5 419 aa26.87■■□□□ 1.89
CBX3-204ENST00000456948 RRP36Q96EU6 259 aaKnown RBP26.87■■□□□ 1.89
CBX3-204ENST00000456948 VTA1Q9NP79 307 aa26.87■■□□□ 1.89
CBX3-204ENST00000456948 SEC63Q9UGP8 760 aaKnown RBP26.87■■□□□ 1.89
CBX3-204ENST00000456948 ALDH5A1P51649 535 aaPredicted RBP26.86■■□□□ 1.89
CBX3-204ENST00000456948 PDE4DQ08499 809 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms