RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 WDR19Q8NEZ3 1342 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 PTPDC1A2A3K4 754 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 SOWAHBA6NEL2 793 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 ASB14A6NK59 587 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 NFIBO00712 420 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 PGK1P00558 417 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 ATN1P54259 1190 aaPredicted RBP18.95■□□□□ 0.62
CPSF6-203ENST00000456847 SEC23AQ15436 765 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
CPSF6-203ENST00000456847 USH1GQ495M9 461 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 RNF180Q86T96 592 aa18.95■□□□□ 0.62
CPSF6-203ENST00000456847 HABP4Q5JVS0 413 aaKnown RBP18.94■□□□□ 0.62
CPSF6-203ENST00000456847 STOX1Q6ZVD7 989 aa18.94■□□□□ 0.62
CPSF6-203ENST00000456847 LSG1Q9H089 658 aaKnown RBP18.94■□□□□ 0.62
CPSF6-203ENST00000456847 SYN1P17600 705 aa18.94■□□□□ 0.62
CPSF6-203ENST00000456847 BAATQ14032 418 aaPredicted RBP18.94■□□□□ 0.62
CPSF6-203ENST00000456847 WTAPQ15007 396 aa18.94■□□□□ 0.62
CPSF6-203ENST00000456847 CHST3Q7LGC8 479 aa18.94■□□□□ 0.62
CPSF6-203ENST00000456847 ADGRF4Q8IZF3 695 aa18.94■□□□□ 0.62
CPSF6-203ENST00000456847 CALML3P27482 149 aa18.93■□□□□ 0.62
CPSF6-203ENST00000456847 ADCYAP1R1P41586 468 aa18.93■□□□□ 0.62
CPSF6-203ENST00000456847 FERMT2Q96AC1 680 aa18.93■□□□□ 0.62
CPSF6-203ENST00000456847 VAT1LQ9HCJ6 419 aa18.93■□□□□ 0.62
CPSF6-203ENST00000456847 CEP290O15078 2479 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 CCDC144BQ3MJ40 725 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 TMEM67Q5HYA8 995 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 SLC30A10Q6XR72 485 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 ADD3Q9UEY8 706 aaKnown RBP18.92■□□□□ 0.62
CPSF6-203ENST00000456847 SYNRGQ9UMZ2 1314 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 CDC45O75419 566 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 RTP1P59025 263 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 CLEC4DQ8WXI8 215 aa18.92■□□□□ 0.62
CPSF6-203ENST00000456847 PURBQ96QR8 312 aaKnown RBP18.92■□□□□ 0.62
CPSF6-203ENST00000456847 ASTN1O14525 1302 aa18.91■□□□□ 0.62
CPSF6-203ENST00000456847 ABCB11O95342 1321 aa18.91■□□□□ 0.62
CPSF6-203ENST00000456847 NOL8Q76FK4 1167 aaKnown RBP18.91■□□□□ 0.62
CPSF6-203ENST00000456847 MB21D2Q8IYB1 491 aaPredicted RBP18.91■□□□□ 0.62
CPSF6-203ENST00000456847 STAG2Q8N3U4 1231 aa18.91■□□□□ 0.62
CPSF6-203ENST00000456847 SPC25Q9HBM1 224 aa18.91■□□□□ 0.62
CPSF6-203ENST00000456847 ATP11BQ9Y2G3 1177 aa18.91■□□□□ 0.62
CPSF6-203ENST00000456847 KLRF2D3W0D1 207 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 SLC27A2O14975 620 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 ADAMTS4O75173 837 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 DUSP11O75319 330 aaKnown RBP18.9■□□□□ 0.62
CPSF6-203ENST00000456847 ALDH5A1P51649 535 aaPredicted RBP18.9■□□□□ 0.62
CPSF6-203ENST00000456847 QRICH1Q2TAL8 776 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 EEPD1Q7L9B9 569 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 RBM27Q9P2N5 1060 aaKnown RBP18.9■□□□□ 0.62
CPSF6-203ENST00000456847 PHF24Q9UPV7 400 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 DDX49Q9Y6V7 483 aaKnown RBP18.9■□□□□ 0.62
CPSF6-203ENST00000456847 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
CPSF6-203ENST00000456847 ANTXR2P58335 489 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 CREB3L3Q68CJ9 461 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 SLC39A5Q6ZMH5 540 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 CATIPQ7Z7H3 387 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 FBXO11Q86XK2 927 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
CPSF6-203ENST00000456847 MPHOSPH6Q99547 160 aaKnown RBP18.9■□□□□ 0.62
CPSF6-203ENST00000456847 KATNBL1Q9H079 304 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 JMJD4Q9H9V9 463 aa18.9■□□□□ 0.62
CPSF6-203ENST00000456847 RPS6P62753 249 aaKnown RBP18.89■□□□□ 0.61
CPSF6-203ENST00000456847 TNFAIP2Q03169 654 aa18.89■□□□□ 0.61
CPSF6-203ENST00000456847 GRM4Q14833 912 aa18.89■□□□□ 0.61
CPSF6-203ENST00000456847 SENP2Q9HC62 589 aa18.89■□□□□ 0.61
CPSF6-203ENST00000456847 MAD2L2Q9UI95 211 aa18.89■□□□□ 0.61
CPSF6-203ENST00000456847 ADCY6O43306 1168 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 PRC1O43663 620 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 RNF20Q5VTR2 975 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 VTA1Q9NP79 307 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 PRKAG2Q9UGJ0 569 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.88■□□□□ 0.61
CPSF6-203ENST00000456847 A0A1W2PQ45 241 aaPredicted RBP18.88■□□□□ 0.61
CPSF6-203ENST00000456847 A0A1W2PQY0 241 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 MCM5P33992 734 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 TRIM60Q495X7 471 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 NUP133Q8WUM0 1156 aa18.88■□□□□ 0.61
CPSF6-203ENST00000456847 TSEN34Q9BSV6 310 aaKnown RBP18.88■□□□□ 0.61
CPSF6-203ENST00000456847 MRPL11Q9Y3B7 192 aaKnown RBP18.88■□□□□ 0.61
CPSF6-203ENST00000456847 PALM3A6NDB9 673 aaPredicted RBP18.87■□□□□ 0.61
CPSF6-203ENST00000456847 MYADML2A6NDP7 307 aa18.87■□□□□ 0.61
CPSF6-203ENST00000456847 NFXL1Q6ZNB6 911 aa18.87■□□□□ 0.61
CPSF6-203ENST00000456847 HOMER1Q86YM7 354 aa18.87■□□□□ 0.61
CPSF6-203ENST00000456847 LOC102724159A0A0B4J2E5 919 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 MOXD2PA6NHM9 499 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 ACLYP53396 1101 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 PDE4DQ08499 809 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 NECTIN1Q15223 517 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 PWP2Q15269 919 aaKnown RBP18.86■□□□□ 0.61
CPSF6-203ENST00000456847 KCNA10Q16322 511 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 MCF2L2Q86YR7 1114 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
CPSF6-203ENST00000456847 KLHDC9Q8NEP7 349 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 IGDCC4Q8TDY8 1250 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 AMNQ9BXJ7 453 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
CPSF6-203ENST00000456847 PRDM5Q9NQX1 630 aaPredicted RBP18.86■□□□□ 0.61
CPSF6-203ENST00000456847 STARD7Q9NQZ5 370 aa18.86■□□□□ 0.61
CPSF6-203ENST00000456847 B4DLN1 442 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms