RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 SART3Q15020 963 aaKnown RBP13.2□□□□□ -0.3
HDAC9-217ENST00000455069 PRAMEF19Q5SWL8 479 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 RNF20Q5VTR2 975 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 ANKRD35Q8N283 1001 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 FAM133AQ8N9E0 248 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 DDX11Q96FC9 970 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 TINF2Q9BSI4 451 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 MTA3Q9BTC8 594 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 SLC5A4Q9NY91 659 aa13.2□□□□□ -0.3
HDAC9-217ENST00000455069 DDX49Q9Y6V7 483 aaKnown RBP13.2□□□□□ -0.3
HDAC9-217ENST00000455069 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 H0YGN5 161 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 CYTH3O43739 400 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
HDAC9-217ENST00000455069 SNAI1O95863 264 aaPredicted RBP13.19□□□□□ -0.3
HDAC9-217ENST00000455069 EXOSC10Q01780 885 aaKnown RBP13.19□□□□□ -0.3
HDAC9-217ENST00000455069 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 MAMDC4Q6UXC1 1216 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 DIS3LQ8TF46 1054 aaKnown RBP13.19□□□□□ -0.3
HDAC9-217ENST00000455069 MTMR8Q96EF0 704 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 TMEM87BQ96K49 555 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
HDAC9-217ENST00000455069 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 OGDHLQ9ULD0 1010 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
HDAC9-217ENST00000455069 PFASO15067 1338 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 DDAH1O94760 285 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 FARP2O94887 1054 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-217ENST00000455069 REC8O95072 547 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 TFRCP02786 760 aaKnown RBP13.18□□□□□ -0.3
HDAC9-217ENST00000455069 CPA1P15085 419 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 RXRAP19793 462 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 LIFRP42702 1097 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 USH1GQ495M9 461 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-217ENST00000455069 RIOX1Q9H6W3 641 aa13.18□□□□□ -0.3
HDAC9-217ENST00000455069 DDX20Q9UHI6 824 aaKnown RBP13.18□□□□□ -0.3
HDAC9-217ENST00000455069 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
HDAC9-217ENST00000455069 SYNGAP1Q96PV0 1343 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 SZT2Q5T011 3432 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 OPLAHO14841 1288 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 ZNF865P0CJ78 1059 aaPredicted RBP13.17□□□□□ -0.3
HDAC9-217ENST00000455069 CNGA1P29973 690 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC9-217ENST00000455069 ANO1Q5XXA6 986 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
HDAC9-217ENST00000455069 CATIPQ7Z7H3 387 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 SGMS1Q86VZ5 419 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
HDAC9-217ENST00000455069 NUP133Q8WUM0 1156 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
HDAC9-217ENST00000455069 USP26Q9BXU7 913 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 KATNBL1Q9H079 304 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 VAT1LQ9HCJ6 419 aa13.17□□□□□ -0.3
HDAC9-217ENST00000455069 KIAA1217Q5T5P2 1943 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 SEPT4O43236 478 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 ADCY6O43306 1168 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 DHX16O60231 1041 aaKnown RBP13.16□□□□□ -0.3
HDAC9-217ENST00000455069 PLEKHA8P1O95397 391 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 BAATQ14032 418 aaPredicted RBP13.16□□□□□ -0.3
HDAC9-217ENST00000455069 KRT32Q14532 448 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 ARMCX2Q7L311 632 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
HDAC9-217ENST00000455069 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
HDAC9-217ENST00000455069 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
HDAC9-217ENST00000455069 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
HDAC9-217ENST00000455069 ABCB11O95342 1321 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 PTPDC1A2A3K4 754 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 CCDC69A6NI79 296 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 ZBTB5O15062 677 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
HDAC9-217ENST00000455069 CAPN2P17655 700 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 RPS6P62753 249 aaKnown RBP13.15□□□□□ -0.3
HDAC9-217ENST00000455069 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 NFXL1Q6ZNB6 911 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 FBXO11Q86XK2 927 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 HOMER1Q86YM7 354 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 ANKLE1Q8NAG6 615 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 DPF3Q92784 378 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 PIGSQ96S52 555 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 HTATIP2Q9BUP3 242 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 PNMA2Q9UL42 364 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 BRPF3Q9ULD4 1205 aa13.15□□□□□ -0.3
HDAC9-217ENST00000455069 MSCO60682 206 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 COL6A1P12109 1028 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 CALML3P27482 149 aa13.14□□□□□ -0.31
HDAC9-217ENST00000455069 ALDH5A1P51649 535 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms