RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 CYP2C18P33260 490 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 MRPL12P52815 198 aaKnown RBP9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 SNAP25P60880 206 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 IRX5P78411 483 aaPredicted RBP9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 ITGA7Q13683 1181 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 TMEM240Q5SV17 173 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 ANKRD45Q5TZF3 282 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 FAM126BQ8IXS8 530 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 DCAF4Q8WV16 495 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 EVI5LQ96CN4 794 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 TSPYL2Q9H2G4 693 aaPredicted RBP9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 SLC28A3Q9HAS3 691 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 IL23AQ9NPF7 189 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 PRR12Q9ULL5 1215 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 FRMPD3Q5JV73 1810 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 PLIN4Q96Q06 1357 aa9.24□□□□□ -0.93
AC007879.2-201ENST00000454444 MYH8P13535 1937 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 RLFQ13129 1914 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 SOWAHBA6NEL2 793 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 ZBBXA8MT70 800 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 ADCY6O43306 1168 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 NMT2O60551 498 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 ICAM1P05362 532 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 SMPD1P17405 629 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 CCL23P55773 120 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 TJAP1Q5JTD0 557 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 FBXO16Q8IX29 292 aaPredicted RBP9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 PI4K2BQ8TCG2 481 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 PBX4Q9BYU1 374 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 GPCPD1Q9NPB8 672 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 HELLSQ9NRZ9 838 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 CYP39A1Q9NYL5 469 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 Q9Y3F1 56 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 RAD50Q92878 1312 aa9.23□□□□□ -0.93
AC007879.2-201ENST00000454444 GRXCR1A8MXD5 290 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 MYL3P08590 195 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 TOP1P11387 765 aaKnown RBP9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 CALML3P27482 149 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 SLC16A2P36021 539 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 CPT1AP50416 773 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 NKX3-2P78367 333 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 PDE4DQ08499 809 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 BAATQ14032 418 aaPredicted RBP9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 MCMDC2Q4G0Z9 681 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 MUM1L1Q5H9M0 696 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 FAM47CQ5HY64 1035 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 SYDE2Q5VT97 1194 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 OTOP2Q7RTS6 562 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 OTUD7AQ8TE49 926 aaPredicted RBP9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 HERVK_113Q902F9 699 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 FGD4Q96M96 766 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 WDR11Q9BZH6 1224 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 TRPV6Q9H1D0 765 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 INCENPQ9NQS7 918 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 PDGFCQ9NRA1 345 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 IL17RBQ9NRM6 502 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 GNEQ9Y223 722 aaKnown RBP9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 SLC4A7Q9Y6M7 1214 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 ZNF536O15090 1300 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 SMCHD1A6NHR9 2005 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 CUL9Q8IWT3 2517 aa9.22□□□□□ -0.93
AC007879.2-201ENST00000454444 LOC102724159A0A0B4J2E5 919 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 ORC4O43929 436 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 CD4P01730 458 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 ACTN1P12814 892 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 PBX2P40425 430 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 MFAP1P55081 439 aaKnown RBP9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 CHMP4BP1P59074 171 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 PSMC6P62333 389 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 PWP2Q15269 919 aaKnown RBP9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 CCDC85BQ15834 202 aaPredicted RBP9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 DUSP28Q4G0W2 176 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 AKNAD1Q5T1N1 836 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 RNF207Q6ZRF8 634 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 MFSD6Q6ZSS7 791 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 C16orf59Q7L2K0 433 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 RETREG2Q8NC44 543 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 OR6J1Q8NGC5 347 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 KATNBL1Q9H079 304 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 RNF41Q9H4P4 317 aaPredicted RBP9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 PRDM12Q9H4Q4 367 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 ANAPC4Q9UJX5 808 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 NOD1Q9Y239 953 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 FRMPD2Q68DX3 1309 aaPredicted RBP9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 ZNFX1Q9P2E3 1918 aaKnown RBP9.21□□□□□ -0.94
AC007879.2-201ENST00000454444 LTBP2Q14767 1821 aa9.2□□□□□ -0.94
AC007879.2-201ENST00000454444 COL6A3P12111 3177 aa9.2□□□□□ -0.94
AC007879.2-201ENST00000454444 NKRFO15226 690 aaKnown RBP eCLIP9.2□□□□□ -0.94
AC007879.2-201ENST00000454444 CTAGE5O15320 804 aa9.2□□□□□ -0.94
AC007879.2-201ENST00000454444 B4GALT4O60513 344 aa9.2□□□□□ -0.94
AC007879.2-201ENST00000454444 KPNA6O60684 536 aa9.2□□□□□ -0.94
AC007879.2-201ENST00000454444 FGAP02671 866 aa9.2□□□□□ -0.94
AC007879.2-201ENST00000454444 PFKMP08237 780 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms