RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 NSMFQ6X4W1 530 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 ZNF467Q7Z7K2 595 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-203ENST00000452013 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 BRF1Q92994 677 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 MTMR8Q96EF0 704 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 RRP36Q96EU6 259 aaKnown RBP10.3□□□□□ -0.76
COL8A1-203ENST00000452013 TCEANC2Q96MN5 208 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 TINF2Q9BSI4 451 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 MYL10Q9BUA6 226 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 UNC93B1Q9H1C4 597 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 A1CFQ9NQ94 594 aaKnown RBP10.3□□□□□ -0.76
COL8A1-203ENST00000452013 ADD3Q9UEY8 706 aaKnown RBP10.3□□□□□ -0.76
COL8A1-203ENST00000452013 NRBP1Q9UHY1 535 aa10.3□□□□□ -0.76
COL8A1-203ENST00000452013 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-203ENST00000452013 GREB1LQ9C091 1923 aaPredicted RBP10.3□□□□□ -0.76
COL8A1-203ENST00000452013 CASP8AP2Q9UKL3 1982 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 PTPDC1A2A3K4 754 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 ASB14A6NK59 587 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 B4DLN1 442 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 SGPL1O95470 568 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 CNGA1P29973 690 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 CYP2C19P33261 490 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 MRPL12P52815 198 aaKnown RBP10.29□□□□□ -0.76
COL8A1-203ENST00000452013 TRIM32Q13049 653 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 BAATQ14032 418 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-203ENST00000452013 RTN1Q16799 776 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 USH1GQ495M9 461 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 MAP3K21Q5TCX8 1036 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 MAMDC4Q6UXC1 1216 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 RNF207Q6ZRF8 634 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 MICU3Q86XE3 530 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 CCDC144CPQ8IYA2 1237 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 FAM133AQ8N9E0 248 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 CLEC4DQ8WXI8 215 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 PIGSQ96S52 555 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 MPHOSPH6Q99547 160 aaKnown RBP10.29□□□□□ -0.76
COL8A1-203ENST00000452013 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 AGXT2Q9BYV1 514 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL8A1-203ENST00000452013 PDRG1Q9NUG6 133 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 MAP3K20Q9NYL2 800 aaKnown RBP10.29□□□□□ -0.76
COL8A1-203ENST00000452013 CYP39A1Q9NYL5 469 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 FLRT1Q9NZU1 646 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
COL8A1-203ENST00000452013 BRPF3Q9ULD4 1205 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
COL8A1-203ENST00000452013 LOC102724159A0A0B4J2E5 919 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 GOLGA8AA7E2F4 631 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 NFIBO00712 420 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 CYTH3O43739 400 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 MSCO60682 206 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 SEC24BO95487 1268 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 IGHA2P01877 340 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 RXRAP19793 462 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 GJA8P48165 433 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 RGS19P49795 217 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 METAP2P50579 478 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL8A1-203ENST00000452013 APOBRQ0VD83 1088 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 PWP2Q15269 919 aaKnown RBP10.28□□□□□ -0.76
COL8A1-203ENST00000452013 ANKRD1Q15327 319 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 SRBD1Q8N5C6 995 aaKnown RBP10.28□□□□□ -0.76
COL8A1-203ENST00000452013 U2AF1L4Q8WU68 220 aaKnown RBP10.28□□□□□ -0.76
COL8A1-203ENST00000452013 DEFB118Q96PH6 123 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 ALDH8A1Q9H2A2 487 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-203ENST00000452013 UPF2Q9HAU5 1272 aaKnown RBP10.28□□□□□ -0.76
COL8A1-203ENST00000452013 PAK6Q9NQU5 681 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-203ENST00000452013 SYNGAP1Q96PV0 1343 aa10.28□□□□□ -0.76
COL8A1-203ENST00000452013 PTPRFP10586 1907 aa10.27□□□□□ -0.76
COL8A1-203ENST00000452013 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 SOWAHBA6NEL2 793 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 PLEKHA8P1O95397 391 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 EN2P19622 333 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-203ENST00000452013 CALML3P27482 149 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 EVCP57679 992 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 C8orf34Q49A92 452 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 TMTC3Q6ZXV5 915 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 RAB11FIP4Q86YS3 637 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 DNERQ8NFT8 737 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 PIBF1Q8WXW3 757 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 ZNF274Q96GC6 653 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-203ENST00000452013 IPO9Q96P70 1041 aaKnown RBP10.27□□□□□ -0.77
COL8A1-203ENST00000452013 UPF3BQ9BZI7 483 aaKnown RBP10.27□□□□□ -0.77
COL8A1-203ENST00000452013 ABHD16BQ9H3Z7 469 aa10.27□□□□□ -0.77
COL8A1-203ENST00000452013 GCOM1H8Y6P7 765 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 SEPT4O43236 478 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 SNAI1O95863 264 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 CFBP00751 764 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 POLR2MP0CAP2 368 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 CYBAP13498 195 aa10.26□□□□□ -0.77
COL8A1-203ENST00000452013 PDIA3P30101 505 aaKnown RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 CCND3P30281 292 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 RPS6P62753 249 aaKnown RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 AKAP17AQ02040 695 aaKnown RBP10.26□□□□□ -0.77
COL8A1-203ENST00000452013 ACVR2BQ13705 512 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms