RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 GPATCH4Q5T3I0 446 aaKnown RBP25.75■■□□□ 1.71
CPSF7-208ENST00000450000 MPHOSPH6Q99547 160 aaKnown RBP25.75■■□□□ 1.71
CPSF7-208ENST00000450000 KRT23Q9C075 422 aa25.75■■□□□ 1.71
CPSF7-208ENST00000450000 CNNM2Q9H8M5 875 aa25.75■■□□□ 1.71
CPSF7-208ENST00000450000 CYP39A1Q9NYL5 469 aa25.75■■□□□ 1.71
CPSF7-208ENST00000450000 PTPDC1A2A3K4 754 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 SOWAHBA6NEL2 793 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 DCDC2CA8MYV0 355 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 CLTBP09497 229 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 ZNF543Q08ER8 600 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 GNASQ5JWF2 1037 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 FGD4Q96M96 766 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 UBAC1Q9BSL1 405 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 AP5M1Q9H0R1 490 aa25.74■■□□□ 1.71
CPSF7-208ENST00000450000 B4E1Z4 1266 aa25.73■■□□□ 1.71
CPSF7-208ENST00000450000 TTC22Q5TAA0 569 aa25.73■■□□□ 1.71
CPSF7-208ENST00000450000 KLHDC9Q8NEP7 349 aa25.73■■□□□ 1.71
CPSF7-208ENST00000450000 PDLIM7Q9NR12 457 aa25.73■■□□□ 1.71
CPSF7-208ENST00000450000 GJA9P57773 515 aa25.72■■□□□ 1.71
CPSF7-208ENST00000450000 TRDNQ13061 729 aa25.72■■□□□ 1.71
CPSF7-208ENST00000450000 BAATQ14032 418 aaPredicted RBP25.72■■□□□ 1.71
CPSF7-208ENST00000450000 EEPD1Q7L9B9 569 aa25.72■■□□□ 1.71
CPSF7-208ENST00000450000 PNMA1Q8ND90 353 aa25.72■■□□□ 1.71
CPSF7-208ENST00000450000 BADQ92934 168 aa25.72■■□□□ 1.71
CPSF7-208ENST00000450000 ZSCAN10Q96SZ4 725 aaPredicted RBP25.72■■□□□ 1.71
CPSF7-208ENST00000450000 TMEM39AQ9NV64 488 aa25.72■■□□□ 1.71
CPSF7-208ENST00000450000 DHX16O60231 1041 aaKnown RBP25.71■■□□□ 1.71
CPSF7-208ENST00000450000 ZEB2O60315 1214 aa25.71■■□□□ 1.71
CPSF7-208ENST00000450000 ASGR1P07306 291 aa25.71■■□□□ 1.71
CPSF7-208ENST00000450000 RAG1P15918 1043 aa25.71■■□□□ 1.71
CPSF7-208ENST00000450000 GPR153Q6NV75 609 aa25.71■■□□□ 1.71
CPSF7-208ENST00000450000 ELP1O95163 1332 aa25.7■■□□□ 1.71
CPSF7-208ENST00000450000 MROH7Q68CQ1 1323 aa25.7■■□□□ 1.71
CPSF7-208ENST00000450000 GOLGA8HP0CJ92 632 aa25.7■■□□□ 1.7
CPSF7-208ENST00000450000 CALML3P27482 149 aa25.7■■□□□ 1.7
CPSF7-208ENST00000450000 CST5P28325 142 aaPredicted RBP25.7■■□□□ 1.7
CPSF7-208ENST00000450000 RNF207Q6ZRF8 634 aa25.7■■□□□ 1.7
CPSF7-208ENST00000450000 RAD50Q92878 1312 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 MYADML2A6NDP7 307 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 B4DLN1 442 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 SNHG28P0DPA3 235 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 PDE4AP27815 886 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 MRPL12P52815 198 aaKnown RBP25.69■■□□□ 1.7
CPSF7-208ENST00000450000 IQSEC1Q6DN90 963 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 KIAA1211Q6ZU35 1233 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 SH3RF1Q7Z6J0 888 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 UPF3AQ9H1J1 476 aaKnown RBP25.69■■□□□ 1.7
CPSF7-208ENST00000450000 VTA1Q9NP79 307 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 ZSWIM5Q9P217 1185 aa25.69■■□□□ 1.7
CPSF7-208ENST00000450000 SMCHD1A6NHR9 2005 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 TRIM43BA6NCK2 446 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 NFIBO00712 420 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 DYNC1LI2O43237 492 aaPredicted RBP25.68■■□□□ 1.7
CPSF7-208ENST00000450000 USH1GQ495M9 461 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 TLK2Q86UE8 772 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 FBXO16Q8IX29 292 aaPredicted RBP25.68■■□□□ 1.7
CPSF7-208ENST00000450000 DEFB123Q8N688 67 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 TRIM43Q96BQ3 446 aaPredicted RBP25.68■■□□□ 1.7
CPSF7-208ENST00000450000 TOX2Q96NM4 488 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 UBA5Q9GZZ9 404 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 KATNBL1Q9H079 304 aa25.68■■□□□ 1.7
CPSF7-208ENST00000450000 TNKSO95271 1327 aa25.67■■□□□ 1.7
CPSF7-208ENST00000450000 WDR19Q8NEZ3 1342 aa25.67■■□□□ 1.7
CPSF7-208ENST00000450000 A0A0U1RQG5 324 aaPredicted RBP25.67■■□□□ 1.7
CPSF7-208ENST00000450000 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.67■■□□□ 1.7
CPSF7-208ENST00000450000 TLR3O15455 904 aaKnown RBP25.67■■□□□ 1.7
CPSF7-208ENST00000450000 PARP1P09874 1014 aaKnown RBP25.67■■□□□ 1.7
CPSF7-208ENST00000450000 GSPT1P15170 499 aaKnown RBP25.67■■□□□ 1.7
CPSF7-208ENST00000450000 ALDH5A1P51649 535 aaPredicted RBP25.67■■□□□ 1.7
CPSF7-208ENST00000450000 ASPRV1Q53RT3 343 aa25.67■■□□□ 1.7
CPSF7-208ENST00000450000 IFIT1BQ5T764 474 aaKnown RBP25.67■■□□□ 1.7
CPSF7-208ENST00000450000 LOC102724159A0A0B4J2E5 919 aa25.66■■□□□ 1.7
CPSF7-208ENST00000450000 ADCY6O43306 1168 aa25.66■■□□□ 1.7
CPSF7-208ENST00000450000 BEX3Q00994 111 aa25.66■■□□□ 1.7
CPSF7-208ENST00000450000 PDE4DQ08499 809 aa25.66■■□□□ 1.7
CPSF7-208ENST00000450000 PWP2Q15269 919 aaKnown RBP25.66■■□□□ 1.7
CPSF7-208ENST00000450000 CCSAPQ6IQ19 270 aaPredicted RBP25.66■■□□□ 1.7
CPSF7-208ENST00000450000 ANKRD33Q7Z3H0 272 aa25.66■■□□□ 1.7
CPSF7-208ENST00000450000 PURBQ96QR8 312 aaKnown RBP25.66■■□□□ 1.7
CPSF7-208ENST00000450000 U3KPZ7 1027 aaPredicted RBP25.66■■□□□ 1.7
CPSF7-208ENST00000450000 CABYRO75952 493 aa25.65■■□□□ 1.7
CPSF7-208ENST00000450000 IRX5P78411 483 aaPredicted RBP25.65■■□□□ 1.7
CPSF7-208ENST00000450000 FSCN1Q16658 493 aaKnown RBP25.65■■□□□ 1.7
CPSF7-208ENST00000450000 ENAHQ8N8S7 591 aaPredicted RBP25.65■■□□□ 1.7
CPSF7-208ENST00000450000 ANKS1AQ92625 1134 aa25.65■■□□□ 1.7
CPSF7-208ENST00000450000 ERICH2A1L162 156 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 ARVCFO00192 962 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 KIAA0355O15063 1070 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 SMPD1P17405 629 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 CDC37Q16543 378 aaPredicted RBP25.64■■□□□ 1.7
CPSF7-208ENST00000450000 SLC30A10Q6XR72 485 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 RALYLQ86SE5 291 aaKnown RBP25.64■■□□□ 1.7
CPSF7-208ENST00000450000 VAT1LQ9HCJ6 419 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 PDGFCQ9NRA1 345 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 Q9Y3F1 56 aa25.64■■□□□ 1.7
CPSF7-208ENST00000450000 DDX49Q9Y6V7 483 aaKnown RBP25.64■■□□□ 1.7
CPSF7-208ENST00000450000 RANBP2P49792 3224 aaKnown RBP25.63■■□□□ 1.69
CPSF7-208ENST00000450000 RPS6P62753 249 aaKnown RBP25.63■■□□□ 1.69
CPSF7-208ENST00000450000 FPGSQ05932 587 aa25.63■■□□□ 1.69
CPSF7-208ENST00000450000 FAAP100Q0VG06 881 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms