RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 PHKBQ93100 1093 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 CNTNAP5Q8WYK1 1306 aa11.4□□□□□ -0.58
CCDC171-203ENST00000449575 CALM1P0DP23 149 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 CALM2P0DP24 149 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 CALM3P0DP25 149 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 ERCC3P19447 782 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 STAT3P40763 770 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 USH1GQ495M9 461 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 MTMR8Q96EF0 704 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 ZNF274Q96GC6 653 aaPredicted RBP11.39□□□□□ -0.59
CCDC171-203ENST00000449575 NID2Q14112 1375 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 FKTNO75072 461 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 ZBED4O75132 1171 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 KIF5BP33176 963 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 PSMC4P43686 418 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 MUM1L1Q5H9M0 696 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 WDR78Q5VTH9 848 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
CCDC171-203ENST00000449575 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 NCAPG2Q86XI2 1143 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 MB21D1Q8N884 522 aa11.39□□□□□ -0.59
CCDC171-203ENST00000449575 RBBP6Q7Z6E9 1792 aaKnown RBP11.38□□□□□ -0.59
CCDC171-203ENST00000449575 MKI67P46013 3256 aaKnown RBP11.38□□□□□ -0.59
CCDC171-203ENST00000449575 DYNC1I1O14576 645 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 CTDNEP1O95476 244 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 ALAS1P13196 640 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 NASPP49321 788 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-203ENST00000449575 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 GABRQQ9UN88 632 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 GOLGA6L22H0YM25 854 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 PFKFB2O60825 505 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 ICAM1P05362 532 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 ANKRD1Q15327 319 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 UTP14CQ5TAP6 766 aaKnown RBP11.38□□□□□ -0.59
CCDC171-203ENST00000449575 RIOX2Q8IUF8 465 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 TBC1D5Q92609 795 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 GPKOWQ92917 476 aaPredicted RBP eCLIP11.38□□□□□ -0.59
CCDC171-203ENST00000449575 COA7Q96BR5 231 aa11.38□□□□□ -0.59
CCDC171-203ENST00000449575 V9GY48 417 aaPredicted RBP11.38□□□□□ -0.59
CCDC171-203ENST00000449575 NFIBO00712 420 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 ATP2A1O14983 1001 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 ZBTB5O15062 677 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 RCAN1P53805 252 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 NOM1Q5C9Z4 860 aaKnown RBP11.37□□□□□ -0.59
CCDC171-203ENST00000449575 GPR142Q7Z601 462 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 GTF3C2Q8WUA4 911 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-203ENST00000449575 SNX21Q969T3 373 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 PURBQ96QR8 312 aaKnown RBP11.37□□□□□ -0.59
CCDC171-203ENST00000449575 RBM28Q9NW13 759 aaKnown RBP11.37□□□□□ -0.59
CCDC171-203ENST00000449575 FAM13BQ9NYF5 915 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 CTDP1Q9Y5B0 961 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-203ENST00000449575 DNAH12Q6ZR08 3092 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 OPLAHO14841 1288 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 FMNL1O95466 1100 aaPredicted RBP11.37□□□□□ -0.59
CCDC171-203ENST00000449575 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 GTF3C6Q969F1 213 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
CCDC171-203ENST00000449575 TNPO2O14787 897 aaKnown RBP11.36□□□□□ -0.59
CCDC171-203ENST00000449575 ZNF500O60304 480 aaPredicted RBP11.36□□□□□ -0.59
CCDC171-203ENST00000449575 JAK2O60674 1132 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 DDIT3P35638 169 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 PKN1Q16512 942 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 GAS2L3Q86XJ1 694 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 CCDC83Q8IWF9 413 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 CLEC4DQ8WXI8 215 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 TRERF1Q96PN7 1200 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 RNF146Q9NTX7 359 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 DDX49Q9Y6V7 483 aaKnown RBP11.36□□□□□ -0.59
CCDC171-203ENST00000449575 PNMA6FA0A0J9YX94 578 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 ADAMTS3O15072 1205 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 ST18O60284 1047 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 PGK2P07205 417 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 GNAQP50148 359 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 OAZ1P54368 228 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 PRKCZQ05513 592 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 OTOP1Q7RTM1 612 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 FBXO11Q86XK2 927 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 TMX3Q96JJ7 454 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 SLC26A6Q9BXS9 759 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 GJD2Q9UKL4 321 aa11.36□□□□□ -0.59
CCDC171-203ENST00000449575 FDX1P10109 184 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 IFNAR1P17181 557 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 SMARCA1P28370 1054 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 CCNA1P78396 465 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 CCAR1Q8IX12 1150 aaKnown RBP11.35□□□□□ -0.59
CCDC171-203ENST00000449575 RRP36Q96EU6 259 aaKnown RBP11.35□□□□□ -0.59
CCDC171-203ENST00000449575 LZTS2Q9BRK4 669 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 GJB4Q9NTQ9 266 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 FCGRTP55899 365 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 PLEKHH3Q7Z736 793 aa11.35□□□□□ -0.59
CCDC171-203ENST00000449575 TNPO1Q92973 898 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms