RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RBBP6Q7Z6E9 1792 aaKnown RBP16.16■□□□□ 0.18
SHMT2-203ENST00000449049 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 KIF23Q02241 960 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-203ENST00000449049 TEX13BQ9BXU2 312 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 C6orf50Q9HD87 102 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 PCDHA4Q9UN74 947 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 MRPL11Q9Y3B7 192 aaKnown RBP16.15■□□□□ 0.18
SHMT2-203ENST00000449049 OPLAHO14841 1288 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 GNA11P29992 359 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 KRT2P35908 639 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 SAFBQ15424 915 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHMT2-203ENST00000449049 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 DIS3L2Q8IYB7 885 aaKnown RBP16.15■□□□□ 0.18
SHMT2-203ENST00000449049 RIC8AQ9NPQ8 531 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 RBPJLQ9UBG7 517 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 RABGAP1Q9Y3P9 1069 aa16.15■□□□□ 0.18
SHMT2-203ENST00000449049 M0R2N6 131 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 F13A1P00488 732 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 U2AF2P26368 475 aaKnown RBP eCLIP16.14■□□□□ 0.174e-8■■□□□ 14.1
SHMT2-203ENST00000449049 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-203ENST00000449049 ADCY7P51828 1080 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 RESTQ13127 1097 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 GRM1Q13255 1194 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 SNRNP48Q6IEG0 339 aaKnown RBP16.14■□□□□ 0.17
SHMT2-203ENST00000449049 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-203ENST00000449049 BLIDQ8IZY5 108 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 SMCR8Q8TEV9 937 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-203ENST00000449049 GLT8D2Q9H1C3 349 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 FOXP1Q9H334 677 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-203ENST00000449049 BRMS1Q9HCU9 246 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 TXNRD2Q9NNW7 524 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
SHMT2-203ENST00000449049 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 KIF28PB7ZC32 967 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 ADAMTS3O15072 1205 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 STAT3P40763 770 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 CLEC4DQ8WXI8 215 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 CUL5Q93034 780 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 PSTPIP2Q9H939 334 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 AOC2O75106 756 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 ALAS1P13196 640 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 MCTP1Q6DN14 999 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 RIOX2Q8IUF8 465 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 ZSCAN16Q9H4T2 348 aaPredicted RBP16.13■□□□□ 0.17
SHMT2-203ENST00000449049 RIPK3Q9Y572 518 aa16.13■□□□□ 0.17
SHMT2-203ENST00000449049 PEX10O60683 326 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 CLK2P49760 499 aaKnown RBP16.12■□□□□ 0.17
SHMT2-203ENST00000449049 MRPL12P52815 198 aaKnown RBP16.12■□□□□ 0.17
SHMT2-203ENST00000449049 GHRHRQ02643 423 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-203ENST00000449049 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
SHMT2-203ENST00000449049 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 SMCHD1A6NHR9 2005 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 PIK3CDO00329 1044 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 ERVK-24P63145 666 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 HTRA3P83110 453 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 NR5A1Q13285 461 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 PLS1Q14651 629 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 TRERF1Q96PN7 1200 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 RNF146Q9NTX7 359 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 PCDHA6Q9UN73 950 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 PCDHA8Q9Y5H6 950 aa16.12■□□□□ 0.17
SHMT2-203ENST00000449049 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
SHMT2-203ENST00000449049 MEIS2O14770 477 aa16.11■□□□□ 0.17
SHMT2-203ENST00000449049 VEGFBP49765 207 aa16.11■□□□□ 0.17
SHMT2-203ENST00000449049 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
SHMT2-203ENST00000449049 MUM1L1Q5H9M0 696 aa16.11■□□□□ 0.17
SHMT2-203ENST00000449049 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
SHMT2-203ENST00000449049 NOSTRINQ8IVI9 506 aa16.11■□□□□ 0.17
SHMT2-203ENST00000449049 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
SHMT2-203ENST00000449049 MOV10L1Q9BXT6 1211 aaKnown RBP16.11■□□□□ 0.17
SHMT2-203ENST00000449049 MAF1Q9H063 256 aa16.11■□□□□ 0.17
SHMT2-203ENST00000449049 NFIBO00712 420 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 SLC25A27O95847 323 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 COPB2P35606 906 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 MAP2K2P36507 400 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 GNL2Q13823 731 aaKnown RBP16.1■□□□□ 0.17
SHMT2-203ENST00000449049 Q3C1V9 767 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 MCF2L2Q86YR7 1114 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 SAMD3Q8N6K7 520 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 CHST13Q8NET6 341 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 UBE2Q2Q8WVN8 375 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 HOMER2Q9NSB8 354 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 ALDH1A1P00352 501 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 HSD17B4P51659 736 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 FAM110CQ1W6H9 321 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.1■□□□□ 0.17
SHMT2-203ENST00000449049 ANKRD13CQ8N6S4 541 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 SHCBP1Q8NEM2 672 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 GPRC5AQ8NFJ5 357 aa16.1■□□□□ 0.17
SHMT2-203ENST00000449049 RASGRP4Q8TDF6 673 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms