RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 PURBQ96QR8 312 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-203ENST00000448428 JMJD4Q9H9V9 463 aa14.88□□□□□ -0.03
PRPF40A-203ENST00000448428 VAT1LQ9HCJ6 419 aa14.88□□□□□ -0.03
PRPF40A-203ENST00000448428 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
PRPF40A-203ENST00000448428 MAD2L2Q9UI95 211 aa14.88□□□□□ -0.03
PRPF40A-203ENST00000448428 PNMA2Q9UL42 364 aa14.88□□□□□ -0.03
PRPF40A-203ENST00000448428 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
PRPF40A-203ENST00000448428 PALM3A6NDB9 673 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 KLRF2D3W0D1 207 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 DNM1LO00429 736 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 ACVR2BQ13705 512 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 SART3Q15020 963 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 CDC37Q16543 378 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 USH1GQ495M9 461 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 ERICH6BQ5W0A0 696 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 SENP6Q9GZR1 1112 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 ABHD16BQ9H3Z7 469 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 NR2E3Q9Y5X4 410 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 DDX49Q9Y6V7 483 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 ASTN1O14525 1302 aa14.87□□□□□ -0.03
PRPF40A-203ENST00000448428 PTPDC1A2A3K4 754 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 ASB14A6NK59 587 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 PRC1O43663 620 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 DHX16O60231 1041 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 RARBP10826 455 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 AKR1A1P14550 325 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 TROAPQ12815 778 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 GRM4Q14833 912 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 LRRC41Q15345 812 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 QRICH1Q2TAL8 776 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 LENG1Q96BZ8 264 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 KATNBL1Q9H079 304 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 XPNPEP3Q9NQH7 507 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 ZHX1Q9UKY1 873 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 FAM184BQ9ULE4 1060 aa14.86□□□□□ -0.03
PRPF40A-203ENST00000448428 BAZ2BQ9UIF8 2168 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 PGK1P00558 417 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 MCM5P33992 734 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 LRRC26Q2I0M4 334 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 SLC35G1Q2M3R5 365 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 CCDC144BQ3MJ40 725 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 RNF207Q6ZRF8 634 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 MTA3Q9BTC8 594 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 LY9Q9HBG7 655 aa14.85□□□□□ -0.03
PRPF40A-203ENST00000448428 KBTBD13C9JR72 458 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 ADCY6O43306 1168 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 CALML3P27482 149 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 RPS6P62753 249 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 RNF20Q5VTR2 975 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 SLC30A10Q6XR72 485 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 CATIPQ7Z7H3 387 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 FBXO11Q86XK2 927 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 C7orf61Q8IZ16 206 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 RASEFQ8IZ41 740 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 RGS22Q8NE09 1264 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 MORC4Q8TE76 937 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 TBC1D5Q92609 795 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 MTMR8Q96EF0 704 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 TMEM87BQ96K49 555 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 RIOX1Q9H6W3 641 aa14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 ADD3Q9UEY8 706 aaKnown RBP14.84□□□□□ -0.03
PRPF40A-203ENST00000448428 SH2B2O14492 632 aaPredicted RBP14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 DUSP11O75319 330 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 ADCYAP1R1P41586 468 aa14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 ALDH5A1P51649 535 aaPredicted RBP14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 TSGA10IPQ3SY00 556 aa14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 TMTC2Q8N394 836 aa14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 NUP133Q8WUM0 1156 aa14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 MYL10Q9BUA6 226 aa14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 ABCB11O95342 1321 aa14.83□□□□□ -0.04
PRPF40A-203ENST00000448428 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 ZBTB5O15062 677 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 CYTH3O43739 400 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 PPP1R11O60927 126 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 ADAMTS4O75173 837 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 LIFRP42702 1097 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 IRX5P78411 483 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 ADCK5Q3MIX3 580 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 TAPT1Q6NXT6 567 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 EEPD1Q7L9B9 569 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 RNF180Q86T96 592 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 KLHDC9Q8NEP7 349 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 FERMT2Q96AC1 680 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 PIGSQ96S52 555 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 MAP3K14Q99558 947 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 AMNQ9BXJ7 453 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 LRRC2Q9BYS8 371 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 PDGFCQ9NRA1 345 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 PHF24Q9UPV7 400 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 COLQQ9Y215 455 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 MRPL11Q9Y3B7 192 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 LRRC37A2A6NM11 1700 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 SYNRGQ9UMZ2 1314 aa14.82□□□□□ -0.04
PRPF40A-203ENST00000448428 LOC102724159A0A0B4J2E5 919 aa14.81□□□□□ -0.04
PRPF40A-203ENST00000448428 CCDC69A6NI79 296 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms