RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 KRT80Q6KB66 452 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 PARP2Q9UGN5 583 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 ASIC3Q9UHC3 531 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 USP42Q9H9J4 1324 aaKnown RBP10.1□□□□□ -0.79
SMC6-207ENST00000448223 TBC1D8BQ0IIM8 1120 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 KIFAP3Q92845 792 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 KLC4Q9NSK0 619 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 CDC23Q9UJX2 597 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 ARHGAP10A1A4S6 786 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 MBD4O95243 580 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 LMNAP02545 664 aaKnown RBP10.1□□□□□ -0.79
SMC6-207ENST00000448223 GYS2P54840 703 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 ASIC1P78348 528 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 MRPS15P82914 257 aaKnown RBP10.1□□□□□ -0.79
SMC6-207ENST00000448223 SLC9C1Q4G0N8 1177 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 MFSD6Q6ZSS7 791 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 DCAF5Q96JK2 942 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 HAUS8Q9BT25 410 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 VPS16Q9H269 839 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 AATFQ9NY61 560 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMC6-207ENST00000448223 BTBD18B2RXH4 712 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 MAGEA1P43355 309 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 DNAJC10Q8IXB1 793 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 IQCDQ96DY2 449 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 NRBF2Q96F24 287 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 SH3GL2Q99962 352 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 PARD6BQ9BYG5 372 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 LZTS1Q9Y250 596 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 PXDNLA1KZ92 1463 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 UBE2Q2LH0YL09 131 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 SCARF1Q14162 830 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 LGSNQ5TDP6 509 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 SYCP3Q8IZU3 236 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 AFAP1L2Q8N4X5 818 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 TEKT1Q969V4 418 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 HELLSQ9NRZ9 838 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 KCNH3Q9ULD8 1083 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 NFE2L3Q9Y4A8 694 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 SLC4A4Q9Y6R1 1079 aa10.1□□□□□ -0.79
SMC6-207ENST00000448223 RICTORQ6R327 1708 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 IFNAR2P48551 515 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 SNX1Q13596 522 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 ENAHQ8N8S7 591 aaPredicted RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 UBAP1Q9NZ09 502 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 FBXO2Q9UK22 296 aaPredicted RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 RCOR1Q9UKL0 485 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 ITGA6P23229 1130 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 CASP1P29466 404 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 RPS6KA1Q15418 735 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 GEN1Q17RS7 908 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 ADALQ6DHV7 355 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 FAM210AQ96ND0 272 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 DDX28Q9NUL7 540 aaKnown RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 TMEM232C9JQI7 657 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 CTNND1O60716 968 aaKnown RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 DNAJC6O75061 913 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 BASP1P80723 227 aaKnown RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 MAP3K12Q12852 859 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 USP37Q86T82 979 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 SMYD4Q8IYR2 804 aaPredicted RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 CNGB3Q9NQW8 809 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 STOML1Q9UBI4 398 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 CARMIL3Q8ND23 1372 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 FAM170AA1A519 330 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 TADA3O75528 432 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 STARD3NLO95772 234 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 PMS1P54277 932 aaKnown RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 HSPA2P54652 639 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 CASP8Q14790 479 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 NAIF1Q69YI7 327 aaPredicted RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 DIS3L2Q8IYB7 885 aaKnown RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 TTC16Q8NEE8 873 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 STAMBPL1Q96FJ0 436 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 THOC1Q96FV9 657 aaKnown RBP10.09□□□□□ -0.79
SMC6-207ENST00000448223 CCDC138Q96M89 665 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 RMI1Q9H9A7 625 aa10.09□□□□□ -0.79
SMC6-207ENST00000448223 WTAPQ15007 396 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 VWA3BQ502W6 1294 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 CCT6BQ92526 530 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ANKRD7Q92527 254 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ACSBG1Q96GR2 724 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 NUP58Q9BVL2 599 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMC6-207ENST00000448223 PCDHA5Q9Y5H7 936 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ADAMTS13Q76LX8 1427 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 RIMBP3CA6NJZ7 1639 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 RIMBP3BA6NNM3 1639 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 RIMBP3Q9UFD9 1639 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 PEAK1Q9H792 1746 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 SPOPO43791 374 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 C3P01024 1663 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 CYP2C19P33261 490 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 BLVRAP53004 296 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 DEUP1Q05D60 604 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 CCDC15Q0P6D6 951 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 LAMB3Q13751 1172 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 ZNF174Q15697 407 aa10.08□□□□□ -0.8
SMC6-207ENST00000448223 TRIM60Q495X7 471 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms