RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 LRRC8AQ8IWT6 810 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 DCAF4Q8WV16 495 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 CUL5Q93034 780 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 GSDMAQ96QA5 445 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 GMLQ99445 158 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 MTRQ99707 1265 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 RIC8AQ9NPQ8 531 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 DISC1Q9NRI5 854 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 R3HCC1Q9Y3T6 440 aaKnown RBP10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 NFE2L3Q9Y4A8 694 aa10.77□□□□□ -0.69
COL6A4P1-201ENST00000446690 TGFB2P61812 414 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 CXCL9Q07325 125 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 CDC37Q16543 378 aaPredicted RBP10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 PTPN21Q16825 1174 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 QRICH1Q2TAL8 776 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 JDP2Q8WYK2 163 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 DPF2Q92785 391 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 TMEM39BQ9GZU3 492 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 TMEM232C9JQI7 657 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 MYO1BO43795 1136 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 COBLO75128 1261 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 TDP2O95551 362 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 NDUFB10O96000 172 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 PRPHP41219 470 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 CALCRLQ16602 461 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 CABP7Q86V35 215 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 FAM151AQ8WW52 585 aa10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 HERC5Q9UII4 1024 aaKnown RBP10.76□□□□□ -0.69
COL6A4P1-201ENST00000446690 ATRNL1Q5VV63 1379 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 A0A1W2PRG0 241 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 SHTN1A0MZ66 631 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L20D6RJB6 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 GTPBP6O43824 516 aaPredicted RBP10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 MARCH6O60337 910 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 ECE1P42892 770 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L24Q0WX57 530 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USH1GQ495M9 461 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 USP17L6PQ6QN14 398 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 CDAN1Q8IWY9 1227 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 ENOX1Q8TC92 643 aaKnown RBP10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 UIMC1Q96RL1 719 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 TAOK3Q9H2K8 898 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 SAMSN1Q9NSI8 373 aaKnown RBP10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 COL4A5P29400 1685 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 CBFA2T2O43439 604 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 SLC37A4O43826 429 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 RPN1P04843 607 aaKnown RBP10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 BMP3P12645 472 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 DHX8Q14562 1220 aaKnown RBP10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 NBPF9Q3BBW0 867 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 AGBL3Q8NEM8 1001 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 MTMR8Q96EF0 704 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 MED15Q96RN5 788 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 CCSER1Q9C0I3 900 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 VPS33BQ9H267 617 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 MAPK8IP1Q9UQF2 711 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 BCS1LQ9Y276 419 aa10.75□□□□□ -0.69
COL6A4P1-201ENST00000446690 SKILP12757 684 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 ERCC5P28715 1186 aaPredicted RBP10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 R3HDM1Q15032 1099 aaKnown RBP10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 ZYXQ15942 572 aaKnown RBP10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 TPD52L1Q16890 204 aaPredicted RBP10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 NAALADL2Q58DX5 795 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 CIAPIN1Q6FI81 312 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 CREBRFQ8IUR6 639 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 GMCL1P1Q8NEA9 526 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 AK8Q96MA6 479 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 IMPACTQ9P2X3 320 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 CTNND2Q9UQB3 1225 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 CNTNAP1P78357 1384 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 EDIL3O43854 480 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 TAL1P17542 331 aaPredicted RBP10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 PLCG1P19174 1290 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 GSDMDP57764 484 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 ACER1Q8TDN7 264 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 GJA10Q969M2 543 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 GMCL1Q96IK5 515 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 MTFR1LQ9H019 292 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 ARHGEF10LQ9HCE6 1279 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 MYOZ2Q9NPC6 264 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 LRWD1Q9UFC0 647 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 DDX25Q9UHL0 483 aaKnown RBP10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 MYH8P13535 1937 aa10.74□□□□□ -0.69
COL6A4P1-201ENST00000446690 SYNRGQ9UMZ2 1314 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 WNT10BO00744 389 aa10.73□□□□□ -0.69
COL6A4P1-201ENST00000446690 CLK2P49760 499 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms