RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 FBXO11Q86XK2 927 aa20.28■□□□□ 0.84
SMARCAL1-209ENST00000444508 ABCB11O95342 1321 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 ZBTB5O15062 677 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 RXRAP19793 462 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 APOA5Q6Q788 366 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 Q6ZUG5 572 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 HOMER1Q86YM7 354 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 RAB11FIP4Q86YS3 637 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 CCDC144CPQ8IYA2 1237 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 DEFB118Q96PH6 123 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 TINF2Q9BSI4 451 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 RIOX1Q9H6W3 641 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 PAK6Q9NQU5 681 aaPredicted RBP20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 CYP39A1Q9NYL5 469 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 CYP46A1Q9Y6A2 500 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 SMCHD1A6NHR9 2005 aa20.27■□□□□ 0.84
SMARCAL1-209ENST00000444508 KLF18A0A0U1RQI7 1052 aa20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 ZBTB43O43298 467 aa20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 TRAF1Q13077 416 aa20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 ZNF467Q7Z7K2 595 aaPredicted RBP20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 MSL3Q8N5Y2 521 aaKnown RBP20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 FANCBQ8NB91 859 aa20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 U2AF1L4Q8WU68 220 aaKnown RBP20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 MTMR8Q96EF0 704 aa20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 TM6SF1Q9BZW5 370 aa20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 NAP1L2Q9ULW6 460 aaPredicted RBP20.26■□□□□ 0.83
SMARCAL1-209ENST00000444508 PTPDC1A2A3K4 754 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 NFIBO00712 420 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 IGHA2P01877 340 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 EN2P19622 333 aaPredicted RBP20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 SMARCA1P28370 1054 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 CNGA1P29973 690 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 CCND3P30281 292 aaPredicted RBP20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 GJA8P48165 433 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 CNTN2Q02246 1040 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 RUFY3Q7L099 469 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 FAM133AQ8N9E0 248 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 CLEC4DQ8WXI8 215 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 BRF1Q92994 677 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 PIGSQ96S52 555 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 SPZ1Q9BXG8 430 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 ZSWIM6Q9HCJ5 1215 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 BRPF3Q9ULD4 1205 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 CNPY2Q9Y2B0 182 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 MRPL11Q9Y3B7 192 aaKnown RBP20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 GTF3C3Q9Y5Q9 886 aa20.25■□□□□ 0.83
SMARCAL1-209ENST00000444508 BAZ2BQ9UIF8 2168 aaKnown RBP20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 CYTH3O43739 400 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 SGPL1O95470 568 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 CYBAP13498 195 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 CAPN2P17655 700 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 RGS19P49795 217 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 ANAPC15P60006 121 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 BAATQ14032 418 aaPredicted RBP20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 SLC35G1Q2M3R5 365 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 RNF207Q6ZRF8 634 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 RBM28Q9NW13 759 aaKnown RBP20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 SEC63Q9UGP8 760 aaKnown RBP20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 NRBP1Q9UHY1 535 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 PCDHA1Q9Y5I3 950 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 SYNGAP1Q96PV0 1343 aa20.24■□□□□ 0.83
SMARCAL1-209ENST00000444508 PNMA6FA0A0J9YX94 578 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 GOLGA8AA7E2F4 631 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 GOLGA8BA8MQT2 603 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 PLEKHA8P1O95397 391 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 TFRCP02786 760 aaKnown RBP20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 CALML3P27482 149 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 RCAN1P53805 252 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 APOBRQ0VD83 1088 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 RTN1Q16799 776 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 MAMDC4Q6UXC1 1216 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 MCF2L2Q86YR7 1114 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 FBXL16Q8N461 479 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 RGS22Q8NE09 1264 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 MAF1Q9H063 256 aa20.23■□□□□ 0.83
SMARCAL1-209ENST00000444508 ASB14A6NK59 587 aa20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 MSCO60682 206 aa20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 SEC24BO95487 1268 aa20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 C8orf34Q49A92 452 aa20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 TMTC3Q6ZXV5 915 aa20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 TRPV1Q8NER1 839 aa20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 FGD4Q96M96 766 aa20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 ADD3Q9UEY8 706 aaKnown RBP20.22■□□□□ 0.83
SMARCAL1-209ENST00000444508 BRCA2P51587 3418 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 SOWAHBA6NEL2 793 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 METAP2P50579 478 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 RPS6P62753 249 aaKnown RBP20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 PRAMEF19Q5SWL8 479 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 SLC30A10Q6XR72 485 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 ARMCX2Q7L311 632 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 CMTR1Q8N1G2 835 aaKnown RBP20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 SHISA4Q96DD7 197 aa20.21■□□□□ 0.83
SMARCAL1-209ENST00000444508 AGXT2Q9BYV1 514 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms