RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ADCY9O60503 1353 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.441e-25■■■■■ 42.4
FN1-211ENST00000443816 XPAP23025 273 aaPredicted RBP12.33□□□□□ -0.44
FN1-211ENST00000443816 PPP2R5CQ13362 524 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 HDXQ7Z353 690 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 IFT122Q9HBG6 1241 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 PLEKHG2Q9H7P9 1386 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 AFF2P51816 1311 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 PPP2R5EQ16537 467 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 RAB17Q9H0T7 212 aa12.33□□□□□ -0.44
FN1-211ENST00000443816 CARMIL3Q8ND23 1372 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 NOL3O60936 208 aaKnown RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 ASNSP08243 561 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 USP17L8P0C7I0 530 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 GCFC2P16383 781 aaKnown RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 KCTD1Q719H9 257 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 ARMCX3Q9UH62 379 aaPredicted RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 AMFRQ9UKV5 643 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 ZBTB1Q9Y2K1 713 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 ADGRL3Q9HAR2 1447 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 CCDC121Q6ZUS5 278 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 PHKA1P46020 1223 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 CFAP221Q4G0U5 840 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 RAB20Q9NX57 234 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 RNF123Q5XPI4 1314 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 KCNQ3O43525 872 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 KRT10P13645 584 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 PHBP35232 272 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 TACC3Q9Y6A5 838 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 I3L4J1 428 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 BPIFB4P59827 614 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 C8orf34Q49A92 452 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 SCYL2Q6P3W7 929 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 INTS8Q75QN2 995 aaKnown RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 AK8Q96MA6 479 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 CPSF3Q9UKF6 684 aaKnown RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 CIB2O75838 187 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 FANCCQ00597 558 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 TMED8Q6PL24 325 aaPredicted RBP12.32□□□□□ -0.44
FN1-211ENST00000443816 CUEDC2Q9H467 287 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 ANAPC5Q9UJX4 755 aa12.32□□□□□ -0.44
FN1-211ENST00000443816 A6NJR5 290 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 RHOXF2BP0C7M4 288 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 GAP43P17677 238 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
FN1-211ENST00000443816 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 GRK7Q8WTQ7 553 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 APOL6Q9BWW8 343 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 CLTCL1P53675 1640 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 PSDA5PKW4 1024 aaPredicted RBP12.31□□□□□ -0.44
FN1-211ENST00000443816 CCDC105Q8IYK2 499 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 CLSTN2Q9H4D0 955 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 ABCC4O15439 1325 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 TBC1D8O95759 1140 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
FN1-211ENST00000443816 TTC1Q99614 292 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
FN1-211ENST00000443816 KIF20BQ96Q89 1820 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 ZNF335Q9H4Z2 1342 aaPredicted RBP12.31□□□□□ -0.44
FN1-211ENST00000443816 RNF8O76064 485 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 CCDC68Q9H2F9 335 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 PALD1Q9ULE6 856 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 LMNB1P20700 586 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 RBSNQ9H1K0 784 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 COPRSQ9NQ92 184 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 ADGRB3O60242 1522 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 ELF1P32519 619 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 MYO1EQ12965 1108 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 ERBB3P21860 1342 aa12.31□□□□□ -0.44
FN1-211ENST00000443816 INO80B-WBP1J3KQ70 363 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 Q3C1V9 767 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 INO80BQ9C086 356 aaPredicted RBP12.3□□□□□ -0.44
FN1-211ENST00000443816 GTF2F1P35269 517 aaKnown RBP eCLIP12.3□□□□□ -0.444e-10■■■■□ 25.6
FN1-211ENST00000443816 PPP2R3AQ06190 1150 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 LRMPQ12912 555 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 RRAGAQ7L523 313 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 P3H4Q92791 437 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 HNRNPDLO14979 420 aaKnown RBP12.3□□□□□ -0.44
FN1-211ENST00000443816 ATP2C2O75185 946 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 RSRC2Q7L4I2 434 aaKnown RBP12.3□□□□□ -0.44
FN1-211ENST00000443816 F8W8V4 182 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 SATB1Q01826 763 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 SURF1Q15526 300 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 ADALQ6DHV7 355 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 PPP1R2P3Q6NXS1 205 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 BLZF1Q9H2G9 400 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 KMT5AQ9NQR1 393 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 MAGI3Q5TCQ9 1506 aa12.3□□□□□ -0.44
FN1-211ENST00000443816 PSAPP07602 524 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms