RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 ASB14A6NK59 587 aa23.87■■□□□ 1.41
UBE2D4-205ENST00000443780 NFIBO00712 420 aa23.87■■□□□ 1.41
UBE2D4-205ENST00000443780 CCDC144BQ3MJ40 725 aa23.87■■□□□ 1.41
UBE2D4-205ENST00000443780 ASPRV1Q53RT3 343 aa23.87■■□□□ 1.41
UBE2D4-205ENST00000443780 KATNBL1Q9H079 304 aa23.87■■□□□ 1.41
UBE2D4-205ENST00000443780 TAF6LQ9Y6J9 622 aa23.87■■□□□ 1.41
UBE2D4-205ENST00000443780 E7EWF7 191 aa23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 ADAMTS4O75173 837 aa23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 DUSP11O75319 330 aaKnown RBP23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 BAATQ14032 418 aaPredicted RBP23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 SLC39A5Q6ZMH5 540 aa23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 CLEC4DQ8WXI8 215 aa23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 FERMT2Q96AC1 680 aa23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 PHF24Q9UPV7 400 aa23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 RBM8AQ9Y5S9 174 aaKnown RBP23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 RANBP2P49792 3224 aaKnown RBP23.86■■□□□ 1.41
UBE2D4-205ENST00000443780 SYNRGQ9UMZ2 1314 aa23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 PARP1P09874 1014 aaKnown RBP23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 RTP1P59025 263 aa23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 BMP2KLQ5H9B9 411 aa23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 KIAA1211Q6ZU35 1233 aa23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 STOX1Q6ZVD7 989 aa23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 RALYLQ86SE5 291 aaKnown RBP23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 NCOA7Q8NI08 942 aa23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 PURBQ96QR8 312 aaKnown RBP23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 GDF15Q99988 308 aa23.85■■□□□ 1.41
UBE2D4-205ENST00000443780 ADCY6O43306 1168 aa23.84■■□□□ 1.41
UBE2D4-205ENST00000443780 FXR1P51114 621 aaKnown RBP eCLIP23.84■■□□□ 1.41
UBE2D4-205ENST00000443780 SNX17Q15036 470 aa23.84■■□□□ 1.41
UBE2D4-205ENST00000443780 ADGRF4Q8IZF3 695 aa23.84■■□□□ 1.41
UBE2D4-205ENST00000443780 ESYT1Q9BSJ8 1104 aa23.84■■□□□ 1.41
UBE2D4-205ENST00000443780 PTPDC1A2A3K4 754 aa23.83■■□□□ 1.41
UBE2D4-205ENST00000443780 KLHDC9Q8NEP7 349 aa23.83■■□□□ 1.41
UBE2D4-205ENST00000443780 TSEN34Q9BSV6 310 aaKnown RBP23.83■■□□□ 1.41
UBE2D4-205ENST00000443780 LSG1Q9H089 658 aaKnown RBP23.83■■□□□ 1.41
UBE2D4-205ENST00000443780 ADD3Q9UEY8 706 aaKnown RBP23.83■■□□□ 1.41
UBE2D4-205ENST00000443780 DDX49Q9Y6V7 483 aaKnown RBP23.83■■□□□ 1.41
UBE2D4-205ENST00000443780 IFIT3O14879 490 aaKnown RBP23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 BMP8BP34820 402 aa23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 MAGEA10P43363 369 aaPredicted RBP23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 CDC37Q16543 378 aaPredicted RBP23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 USH1GQ495M9 461 aa23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 RNF207Q6ZRF8 634 aa23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 MORC4Q8TE76 937 aa23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 ATP11BQ9Y2G3 1177 aa23.82■■□□□ 1.4
UBE2D4-205ENST00000443780 A0A1W2PPC1 479 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 ERICH2A1L162 156 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 C1orf53Q5VUE5 145 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 SLC30A10Q6XR72 485 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 STAG2Q8N3U4 1231 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 UPF3AQ9H1J1 476 aaKnown RBP23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 JMJD4Q9H9V9 463 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 VAT1LQ9HCJ6 419 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 LTBP2Q14767 1821 aa23.81■■□□□ 1.4
UBE2D4-205ENST00000443780 LOC102724159A0A0B4J2E5 919 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 A0A1W2PQ45 241 aaPredicted RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 A0A1W2PQY0 241 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 MYADML2A6NDP7 307 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 DHX16O60231 1041 aaKnown RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 CALML3P27482 149 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 CST5P28325 142 aaPredicted RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 ALDH5A1P51649 535 aaPredicted RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 ACLYP53396 1101 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 GJA9P57773 515 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 RPS6P62753 249 aaKnown RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 TNFAIP2Q03169 654 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 SART3Q15020 963 aaKnown RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 PWP2Q15269 919 aaKnown RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 KCNA10Q16322 511 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 QRICH1Q2TAL8 776 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 TRIM60Q495X7 471 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 CCSAPQ6IQ19 270 aaPredicted RBP23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 CHST3Q7LGC8 479 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 SPC25Q9HBM1 224 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 SENP2Q9HC62 589 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 PCDH10Q9P2E7 1040 aa23.8■■□□□ 1.4
UBE2D4-205ENST00000443780 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 KLRF2D3W0D1 207 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 C6orf222P0C671 652 aaPredicted RBP23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 ANTXR2P58335 489 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 IRX5P78411 483 aaPredicted RBP23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 WTAPQ15007 396 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 TAPT1Q6NXT6 567 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 EEPD1Q7L9B9 569 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 MB21D2Q8IYB1 491 aaPredicted RBP23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 RGS22Q8NE09 1264 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 CCDC136Q96JN2 1154 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 VTA1Q9NP79 307 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 PDGFCQ9NRA1 345 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 MAD2L2Q9UI95 211 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 ABCB11O95342 1321 aa23.79■■□□□ 1.4
UBE2D4-205ENST00000443780 PALM3A6NDB9 673 aaPredicted RBP23.78■■□□□ 1.4
UBE2D4-205ENST00000443780 MOXD2PA6NHM9 499 aa23.78■■□□□ 1.4
UBE2D4-205ENST00000443780 FBXO16Q8IX29 292 aaPredicted RBP23.78■■□□□ 1.4
UBE2D4-205ENST00000443780 PCSK9Q8NBP7 692 aaKnown RBP23.78■■□□□ 1.4
UBE2D4-205ENST00000443780 KIAA1217Q5T5P2 1943 aa23.77■■□□□ 1.4
UBE2D4-205ENST00000443780 NKX3-2P78367 333 aa23.77■■□□□ 1.4
UBE2D4-205ENST00000443780 GRM4Q14833 912 aa23.77■■□□□ 1.4
UBE2D4-205ENST00000443780 TMEM67Q5HYA8 995 aa23.77■■□□□ 1.4
UBE2D4-205ENST00000443780 IQSEC1Q6DN90 963 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms