RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 ADAMTS4O75173 837 aa24.28■■□□□ 1.48
VIL1-204ENST00000440053 SEC23AQ15436 765 aa24.28■■□□□ 1.48
VIL1-204ENST00000440053 GPATCH4Q5T3I0 446 aaKnown RBP24.28■■□□□ 1.48
VIL1-204ENST00000440053 STOX1Q6ZVD7 989 aa24.28■■□□□ 1.48
VIL1-204ENST00000440053 MAP4K1Q92918 833 aa24.28■■□□□ 1.48
VIL1-204ENST00000440053 UBAC1Q9BSL1 405 aa24.28■■□□□ 1.48
VIL1-204ENST00000440053 ATP11BQ9Y2G3 1177 aa24.28■■□□□ 1.48
VIL1-204ENST00000440053 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.27■■□□□ 1.48
VIL1-204ENST00000440053 MYADML2A6NDP7 307 aa24.27■■□□□ 1.48
VIL1-204ENST00000440053 PTGS1P23219 599 aa24.27■■□□□ 1.48
VIL1-204ENST00000440053 MAGEA10P43363 369 aaPredicted RBP24.27■■□□□ 1.48
VIL1-204ENST00000440053 NT5C2P49902 561 aa24.27■■□□□ 1.48
VIL1-204ENST00000440053 CHST3Q7LGC8 479 aa24.27■■□□□ 1.48
VIL1-204ENST00000440053 RNF180Q86T96 592 aa24.27■■□□□ 1.48
VIL1-204ENST00000440053 SENP2Q9HC62 589 aa24.27■■□□□ 1.48
VIL1-204ENST00000440053 VAT1LQ9HCJ6 419 aa24.27■■□□□ 1.48
VIL1-204ENST00000440053 E7EWF7 191 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 USH1GQ495M9 461 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 IFIT1BQ5T764 474 aaKnown RBP24.26■■□□□ 1.47
VIL1-204ENST00000440053 CENPQQ7L2Z9 268 aaPredicted RBP24.26■■□□□ 1.47
VIL1-204ENST00000440053 EEPD1Q7L9B9 569 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 ADGRF4Q8IZF3 695 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 STAG2Q8N3U4 1231 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 PHF24Q9UPV7 400 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 SYNRGQ9UMZ2 1314 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 PTPDC1A2A3K4 754 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 TRIM60Q495X7 471 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 TMEM63BQ5T3F8 832 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 PDGFCQ9NRA1 345 aa24.26■■□□□ 1.47
VIL1-204ENST00000440053 RBM8AQ9Y5S9 174 aaKnown RBP24.26■■□□□ 1.47
VIL1-204ENST00000440053 ASB14A6NK59 587 aa24.25■■□□□ 1.47
VIL1-204ENST00000440053 DUSP11O75319 330 aaKnown RBP24.25■■□□□ 1.47
VIL1-204ENST00000440053 CALML3P27482 149 aa24.25■■□□□ 1.47
VIL1-204ENST00000440053 MDM2Q00987 491 aaPredicted RBP24.25■■□□□ 1.47
VIL1-204ENST00000440053 TRDNQ13061 729 aa24.25■■□□□ 1.47
VIL1-204ENST00000440053 KCNA10Q16322 511 aa24.25■■□□□ 1.47
VIL1-204ENST00000440053 SLC30A10Q6XR72 485 aa24.25■■□□□ 1.47
VIL1-204ENST00000440053 KLHDC9Q8NEP7 349 aa24.25■■□□□ 1.47
VIL1-204ENST00000440053 TBC1D5Q92609 795 aa24.25■■□□□ 1.47
VIL1-204ENST00000440053 PARP1P09874 1014 aaKnown RBP24.24■■□□□ 1.47
VIL1-204ENST00000440053 TRIOBPQ9H2D6 2365 aa24.23■■□□□ 1.47
VIL1-204ENST00000440053 MCM3APO60318 1980 aa24.23■■□□□ 1.47
VIL1-204ENST00000440053 A0A1W2PQ45 241 aaPredicted RBP24.23■■□□□ 1.47
VIL1-204ENST00000440053 A0A1W2PQY0 241 aa24.23■■□□□ 1.47
VIL1-204ENST00000440053 CDC37Q16543 378 aaPredicted RBP24.23■■□□□ 1.47
VIL1-204ENST00000440053 CCSAPQ6IQ19 270 aaPredicted RBP24.23■■□□□ 1.47
VIL1-204ENST00000440053 ESYT1Q9BSJ8 1104 aa24.23■■□□□ 1.47
VIL1-204ENST00000440053 LSG1Q9H089 658 aaKnown RBP24.23■■□□□ 1.47
VIL1-204ENST00000440053 JMJD4Q9H9V9 463 aa24.23■■□□□ 1.47
VIL1-204ENST00000440053 SZT2Q5T011 3432 aa24.22■■□□□ 1.47
VIL1-204ENST00000440053 IFIT3O14879 490 aaKnown RBP24.22■■□□□ 1.47
VIL1-204ENST00000440053 C6orf222P0C671 652 aaPredicted RBP24.22■■□□□ 1.47
VIL1-204ENST00000440053 ACLYP53396 1101 aa24.22■■□□□ 1.47
VIL1-204ENST00000440053 TNFAIP2Q03169 654 aa24.22■■□□□ 1.47
VIL1-204ENST00000440053 COL9A3Q14050 684 aaPredicted RBP24.22■■□□□ 1.47
VIL1-204ENST00000440053 ASPRV1Q53RT3 343 aa24.22■■□□□ 1.47
VIL1-204ENST00000440053 TAPT1Q6NXT6 567 aa24.22■■□□□ 1.47
VIL1-204ENST00000440053 RNF207Q6ZRF8 634 aa24.22■■□□□ 1.47
VIL1-204ENST00000440053 FBXO16Q8IX29 292 aaPredicted RBP24.22■■□□□ 1.47
VIL1-204ENST00000440053 WDR19Q8NEZ3 1342 aa24.21■■□□□ 1.47
VIL1-204ENST00000440053 DHX16O60231 1041 aaKnown RBP24.21■■□□□ 1.47
VIL1-204ENST00000440053 BMP8BP34820 402 aa24.21■■□□□ 1.47
VIL1-204ENST00000440053 ALDH5A1P51649 535 aaPredicted RBP24.21■■□□□ 1.47
VIL1-204ENST00000440053 ANTXR2P58335 489 aa24.21■■□□□ 1.47
VIL1-204ENST00000440053 RPS6P62753 249 aaKnown RBP24.21■■□□□ 1.47
VIL1-204ENST00000440053 SNX17Q15036 470 aa24.21■■□□□ 1.47
VIL1-204ENST00000440053 NOL8Q76FK4 1167 aaKnown RBP24.21■■□□□ 1.47
VIL1-204ENST00000440053 SH3RF1Q7Z6J0 888 aa24.21■■□□□ 1.47
VIL1-204ENST00000440053 NCOA7Q8NI08 942 aa24.21■■□□□ 1.47
VIL1-204ENST00000440053 MAD2L2Q9UI95 211 aa24.21■■□□□ 1.47
VIL1-204ENST00000440053 CTAGE5O15320 804 aa24.2■■□□□ 1.47
VIL1-204ENST00000440053 GJA9P57773 515 aa24.2■■□□□ 1.47
VIL1-204ENST00000440053 BEX3Q00994 111 aa24.2■■□□□ 1.47
VIL1-204ENST00000440053 TLE2Q04725 743 aa24.2■■□□□ 1.47
VIL1-204ENST00000440053 QRICH1Q2TAL8 776 aa24.2■■□□□ 1.47
VIL1-204ENST00000440053 KIAA1211Q6ZU35 1233 aa24.2■■□□□ 1.47
VIL1-204ENST00000440053 RALYLQ86SE5 291 aaKnown RBP24.2■■□□□ 1.47
VIL1-204ENST00000440053 TSEN34Q9BSV6 310 aaKnown RBP24.2■■□□□ 1.47
VIL1-204ENST00000440053 SOX1O00570 391 aaPredicted RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 SMPD1P17405 629 aa24.19■■□□□ 1.46
VIL1-204ENST00000440053 GNASQ5JWF2 1037 aa24.19■■□□□ 1.46
VIL1-204ENST00000440053 MORC4Q8TE76 937 aa24.19■■□□□ 1.46
VIL1-204ENST00000440053 UBE2OQ9C0C9 1292 aaKnown RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 UPF3AQ9H1J1 476 aaKnown RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 PRDM5Q9NQX1 630 aaPredicted RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 GPHNQ9NQX3 736 aaPredicted RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 GNEQ9Y223 722 aaKnown RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 KLRF2D3W0D1 207 aa24.19■■□□□ 1.46
VIL1-204ENST00000440053 ASGR1P07306 291 aa24.19■■□□□ 1.46
VIL1-204ENST00000440053 SLC35G1Q2M3R5 365 aa24.19■■□□□ 1.46
VIL1-204ENST00000440053 MB21D2Q8IYB1 491 aaPredicted RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 ADD3Q9UEY8 706 aaKnown RBP24.19■■□□□ 1.46
VIL1-204ENST00000440053 LCTP09848 1927 aa24.18■■□□□ 1.46
VIL1-204ENST00000440053 TRIM43BA6NCK2 446 aa24.18■■□□□ 1.46
VIL1-204ENST00000440053 PALM3A6NDB9 673 aaPredicted RBP24.18■■□□□ 1.46
VIL1-204ENST00000440053 DYNC1LI2O43237 492 aaPredicted RBP24.18■■□□□ 1.46
VIL1-204ENST00000440053 WTAPQ15007 396 aa24.18■■□□□ 1.46
VIL1-204ENST00000440053 BMP2KLQ5H9B9 411 aa24.18■■□□□ 1.46
VIL1-204ENST00000440053 C1orf53Q5VUE5 145 aa24.18■■□□□ 1.46
VIL1-204ENST00000440053 IGDCC4Q8TDY8 1250 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms