RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 CPXCR1Q8N123 301 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 CMTR1Q8N1G2 835 aaKnown RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 NUP58Q9BVL2 599 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 CDC23Q9UJX2 597 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 B4DLN1 442 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 KCNA2P16389 499 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 BSPRYQ5W0U4 402 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 CASC4Q6P4E1 433 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 STX12Q86Y82 276 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 NELFCDQ8IXH7 590 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 TEKT1Q969V4 418 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 MADDQ8WXG6 1647 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 METP08581 1390 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 POLR2FP61218 127 aaKnown RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 ITIH3Q06033 890 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 ACBD5Q5T8D3 534 aaPredicted RBP12.69□□□□□ -0.38
CCBE1-202ENST00000439986 OR8K1Q8NGG5 319 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 KIFAP3Q92845 792 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 DTNBP1Q96EV8 351 aa12.69□□□□□ -0.38
CCBE1-202ENST00000439986 ATP1A3P13637 1013 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 RPGRIP1Q96KN7 1286 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 TACC3Q9Y6A5 838 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 MAN1A1P33908 653 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 IFRD2Q12894 506 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-202ENST00000439986 ATP6V0A1Q93050 837 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-202ENST00000439986 MAGEA1P43355 309 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 TOB2Q14106 344 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-202ENST00000439986 NOP9Q86U38 636 aaKnown RBP12.68□□□□□ -0.38
CCBE1-202ENST00000439986 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 IFT20Q8IY31 132 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-202ENST00000439986 SHROOM2Q13796 1616 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 ADCY10Q96PN6 1610 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 A6NNZ2 444 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 PPP1R2P41236 205 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 TUBB8Q3ZCM7 444 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 LRRC24Q50LG9 513 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 EAPPQ56P03 285 aaPredicted RBP12.68□□□□□ -0.38
CCBE1-202ENST00000439986 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 KIF1BO60333 1816 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 KMT5BQ4FZB7 885 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 SPATA1Q5VX52 437 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 ATL2Q8NHH9 583 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 KCNF1Q9H3M0 494 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 UNC13BO14795 1591 aa12.68□□□□□ -0.38
CCBE1-202ENST00000439986 USP27XA6NNY8 438 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 NOX5Q96PH1 765 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 UNC45AQ9H3U1 944 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 MED4Q9NPJ6 270 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 RYDENQ9NUL5 291 aaKnown RBP12.67□□□□□ -0.38
CCBE1-202ENST00000439986 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCBE1-202ENST00000439986 KCNJ18B7U540 433 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 KIF23Q02241 960 aaPredicted RBP12.67□□□□□ -0.38
CCBE1-202ENST00000439986 KCNJ12Q14500 433 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 RDH13Q8NBN7 331 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 FAM71BQ8TC56 605 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 PARD6BQ9BYG5 372 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 NKIRAS1Q9NYS0 192 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 ERBB3P21860 1342 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 CALUO43852 315 aaPredicted RBP12.67□□□□□ -0.38
CCBE1-202ENST00000439986 CASP14P31944 242 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 DRC3Q9H069 523 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 KAT6BQ8WYB5 2073 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 ABL1P00519 1130 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 STMN1P16949 149 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 CUL4BQ13620 913 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 PPP2R5BQ15173 497 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 CADPS2Q86UW7 1296 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 TTC1Q99614 292 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 UTP11Q9Y3A2 253 aaKnown RBP12.67□□□□□ -0.38
CCBE1-202ENST00000439986 MAST3O60307 1309 aa12.67□□□□□ -0.38
CCBE1-202ENST00000439986 PLCG2P16885 1265 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 ALDH3A1P30838 453 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 CNNM4Q6P4Q7 775 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 VSTM4Q8IW00 320 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 IQCDQ96DY2 449 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 SEL1LQ9UBV2 794 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 PNPLA6Q8IY17 1366 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 PRAMEF22A3QJZ6 481 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 PPP6R2O75170 966 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 FLT3P36888 993 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 CLUL1Q15846 466 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 SLC35F6Q8N357 371 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 IFIH1Q9BYX4 1025 aaKnown RBP12.66□□□□□ -0.38
CCBE1-202ENST00000439986 CCDC189A1A4V9 331 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 CCDC151A5D8V7 595 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 GCNT3O95395 438 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 HNRNPH2P55795 449 aaKnown RBP12.66□□□□□ -0.38
CCBE1-202ENST00000439986 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 ANKRD2Q9GZV1 360 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 HAUS4Q9H6D7 363 aa12.66□□□□□ -0.38
CCBE1-202ENST00000439986 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms