RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 RABGAP1Q9Y3P9 1069 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 CTDP1Q9Y5B0 961 aaPredicted RBP8.61□□□□□ -1.03
UBR3-205ENST00000439681 ADGRA2Q96PE1 1338 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 LOC285556D6RIA3 1793 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 VPS37CA5D8V6 355 aaPredicted RBP8.61□□□□□ -1.03
UBR3-205ENST00000439681 BTBD18B2RXH4 712 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 KIF28PB7ZC32 967 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 M0R2N6 131 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 ZSCAN22P10073 491 aaPredicted RBP8.61□□□□□ -1.03
UBR3-205ENST00000439681 TRAF1Q13077 416 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 TRIM29Q14134 588 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 MUM1L1Q5H9M0 696 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 SNRNP48Q6IEG0 339 aaKnown RBP8.61□□□□□ -1.03
UBR3-205ENST00000439681 DAGLBQ8NCG7 672 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 TNFRSF25Q93038 417 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 PARK7Q99497 189 aaKnown RBP8.61□□□□□ -1.03
UBR3-205ENST00000439681 TEX13BQ9BXU2 312 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 SPATC1LQ9H0A9 340 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 PSTPIP2Q9H939 334 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 RIC8AQ9NPQ8 531 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 PNMA2Q9UL42 364 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 PCDHA4Q9UN74 947 aa8.61□□□□□ -1.03
UBR3-205ENST00000439681 MRPL11Q9Y3B7 192 aaKnown RBP8.61□□□□□ -1.03
UBR3-205ENST00000439681 ABCB11O95342 1321 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 MEIS2O14770 477 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 ALAS1P13196 640 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 HSPA6P17066 643 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.035e-7■□□□□ 9.8
UBR3-205ENST00000439681 MAP2K2P36507 400 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 GCLCP48506 637 aaPredicted RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 NUCB2P80303 420 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 RESTQ13127 1097 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 NR5A1Q13285 461 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 NOM1Q5C9Z4 860 aaKnown RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 FOXD4L5Q5VV16 416 aaPredicted RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 GALNT17Q6IS24 598 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 RIOX2Q8IUF8 465 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 DIS3L2Q8IYB7 885 aaKnown RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 BLIDQ8IZY5 108 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 CCDC148Q8NFR7 591 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 GTF3C2Q8WUA4 911 aaPredicted RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 CCDC12Q8WUD4 166 aaPredicted RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 FOXD4L4Q8WXT5 416 aaPredicted RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 TRERF1Q96PN7 1200 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 PAGR1Q9BTK6 254 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 MOV10L1Q9BXT6 1211 aaKnown RBP8.6□□□□□ -1.03
UBR3-205ENST00000439681 C6orf50Q9HD87 102 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 MORF4L1Q9UBU8 362 aa8.6□□□□□ -1.03
UBR3-205ENST00000439681 NFIBO00712 420 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 CALML3P27482 149 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
UBR3-205ENST00000439681 ADCY7P51828 1080 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 MRPL12P52815 198 aaKnown RBP8.59□□□□□ -1.03
UBR3-205ENST00000439681 ERVK-9P63128 1117 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 ERVK-24P63145 666 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 GHRHRQ02643 423 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 PLS1Q14651 629 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 TKFCQ3LXA3 575 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 EARS2Q5JPH6 523 aaKnown RBP8.59□□□□□ -1.03
UBR3-205ENST00000439681 FERMT3Q86UX7 667 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 ANKRD13CQ8N6S4 541 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 GPRC5AQ8NFJ5 357 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 SMCR8Q8TEV9 937 aaPredicted RBP8.59□□□□□ -1.03
UBR3-205ENST00000439681 FOXP1Q9H334 677 aaPredicted RBP8.59□□□□□ -1.03
UBR3-205ENST00000439681 PCDHA6Q9UN73 950 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 PCDHA8Q9Y5H6 950 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 RLFQ13129 1914 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 PTPRFP10586 1907 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 CA12O43570 354 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 TLR2O60603 784 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 F13A1P00488 732 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 BCRP11274 1271 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 GNA11P29992 359 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 KRT2P35908 639 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 SAFBQ15424 915 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR3-205ENST00000439681 TAF1CQ15572 869 aaPredicted RBP8.59□□□□□ -1.03
UBR3-205ENST00000439681 UBE2SQ16763 222 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 MCTP1Q6DN14 999 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 USP17L6PQ6QN14 398 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 C17orf99Q6UX52 265 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 CUL5Q93034 780 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 HOMER2Q9NSB8 354 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 RNF146Q9NTX7 359 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 TMEM260Q9NX78 707 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
UBR3-205ENST00000439681 CPA4Q9UI42 421 aa8.59□□□□□ -1.03
UBR3-205ENST00000439681 PIK3CDO00329 1044 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 SLC25A27O95847 323 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 ERCC3P19447 782 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 HSD17B4P51659 736 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 CRHR2Q13324 411 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 CHST13Q8NET6 341 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 GLT8D2Q9H1C3 349 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 PORCNQ9H237 461 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 ZFYVE28Q9HCC9 887 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 BAZ2BQ9UIF8 2168 aaKnown RBP8.58□□□□□ -1.04
UBR3-205ENST00000439681 FAM205CA6NFA0 338 aa8.58□□□□□ -1.04
UBR3-205ENST00000439681 GCOM1H8Y6P7 765 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms