RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 TMOD2Q9NZR1 351 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 BCS1LQ9Y276 419 aa15.69■□□□□ 0.1
PTCHD3-201ENST00000438700 VGLL3A8MV65 326 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 ATP2B2Q01814 1243 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 CERKLQ49MI3 558 aaPredicted RBP15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 WWC2Q6AWC2 1192 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 HEATR3Q7Z4Q2 680 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 TRERF1Q96PN7 1200 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 KCND1Q9NSA2 647 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 CD2APQ9Y5K6 639 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 MYO1BO43795 1136 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 COBLO75128 1261 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 SH3GLB2Q9NR46 395 aa15.68■□□□□ 0.1
PTCHD3-201ENST00000438700 CALML3P27482 149 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 DPYDQ12882 1025 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 MAPK8IP2Q13387 824 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 HOMER1Q86YM7 354 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 AGBL3Q8NEM8 1001 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 JDP2Q8WYK2 163 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 CSRNP1Q96S65 589 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 UBA5Q9GZZ9 404 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 ZNF70Q9UC06 446 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 COL2A1P02458 1487 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 PTGER2P43116 358 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 TRAPPC10P48553 1259 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 TATDN1Q6P1N9 297 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 VAT1LQ9HCJ6 419 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 PCDHA4Q9UN74 947 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 SYNRGQ9UMZ2 1314 aa15.67■□□□□ 0.1
PTCHD3-201ENST00000438700 STXBP3O00186 592 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 SNHG28P0DPA3 235 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 CLCN6P51797 869 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 ADKP55263 362 aaKnown RBP15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 DHX8Q14562 1220 aaKnown RBP15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 ASPRV1Q53RT3 343 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 CIAPIN1Q6FI81 312 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 RRP36Q96EU6 259 aaKnown RBP15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 BARHL2Q9NY43 387 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 GDF11O95390 407 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 ERCC5P28715 1186 aaPredicted RBP15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 IRX5P78411 483 aaPredicted RBP15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 E2F4Q16254 413 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 IQUBQ8NA54 791 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 EPC1Q9H2F5 836 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 GPCPD1Q9NPB8 672 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 FHOD1Q9Y613 1164 aa15.66■□□□□ 0.1
PTCHD3-201ENST00000438700 CCDC194A0A1B0GVG4 234 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 SMARCA1P28370 1054 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 INF2Q27J81 1249 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 SPECC1LQ69YQ0 1117 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 CCDC148Q8NFR7 591 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 GSDMAQ96QA5 445 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 PIGSQ96S52 555 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 MTRQ99707 1265 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 VEZTQ9HBM0 779 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 FANCGO15287 622 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 H2AFXP16104 143 aaPredicted RBP15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 KCNJ6P48051 423 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 CUL4BQ13620 913 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 SEPT2Q15019 361 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 TMX1Q9H3N1 280 aa15.65■□□□□ 0.1
PTCHD3-201ENST00000438700 CNTNAP1P78357 1384 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 SHTN1A0MZ66 631 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 EEF2P13639 858 aaKnown RBP15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 RASSF7Q02833 373 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 ZNF543Q08ER8 600 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 KARSQ15046 597 aaKnown RBP15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 ABCB5Q2M3G0 1257 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 TAF3Q5VWG9 929 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 PDXDC2PQ6P474 469 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 RIOX1Q9H6W3 641 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 KANSL2Q9H9L4 492 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 CTNND2Q9UQB3 1225 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 PP2D1A8MPX8 630 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 KIF2AO00139 706 aaPredicted RBP15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 TEX33O43247 280 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 CCDC96Q2M329 555 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 ARHGAP29Q52LW3 1261 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 SPATA1Q5VX52 437 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 TMEM179Q6ZVK1 233 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 TMEM139Q8IV31 216 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 NLGN2Q8NFZ4 835 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 FAM151AQ8WW52 585 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 L2HGDHQ9H9P8 463 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 PCDHA6Q9UN73 950 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 PCDHA8Q9Y5H6 950 aa15.64■□□□□ 0.09
PTCHD3-201ENST00000438700 PPP1R3GB7ZBB8 358 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 RAD21O60216 631 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 PLA2G4AP47712 749 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 NAPAP54920 295 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 ICA1Q05084 483 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 TBX2Q13207 712 aaPredicted RBP15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 C4orf32Q8N8J7 132 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 TC2NQ8N9U0 490 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 MTMR14Q8NCE2 650 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms