RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 SNRNP48Q6IEG0 339 aaKnown RBP13.28□□□□□ -0.28
SNHG3-202ENST00000437681 GALNT17Q6IS24 598 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 CHST3Q7LGC8 479 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 OTOP1Q7RTM1 612 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
SNHG3-202ENST00000437681 DNERQ8NFT8 737 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 MORC4Q8TE76 937 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 WASF1Q92558 559 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 TRIM47Q96LD4 638 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 SENP2Q9HC62 589 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 ERCC3P19447 782 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 Q3C1V9 767 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 TTBK2Q6IQ55 1244 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
SNHG3-202ENST00000437681 CCPG1Q9ULG6 757 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 FRMPD2Q68DX3 1309 aaPredicted RBP13.28□□□□□ -0.28
SNHG3-202ENST00000437681 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
SNHG3-202ENST00000437681 KCTD2Q14681 263 aa13.27□□□□□ -0.28
SNHG3-202ENST00000437681 MAMDC4Q6UXC1 1216 aa13.27□□□□□ -0.28
SNHG3-202ENST00000437681 MMP19Q99542 508 aa13.27□□□□□ -0.28
SNHG3-202ENST00000437681 PAGR1Q9BTK6 254 aa13.27□□□□□ -0.28
SNHG3-202ENST00000437681 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
SNHG3-202ENST00000437681 NEK4P51957 841 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 AK2P54819 239 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 APOBRQ0VD83 1088 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 NTRK3Q16288 839 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 XRRA1Q6P2D8 792 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 STAG2Q8N3U4 1231 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 NUP133Q8WUM0 1156 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 SNX21Q969T3 373 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 ARMC5Q96C12 935 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 FRMPD4Q14CM0 1322 aa13.27□□□□□ -0.29
SNHG3-202ENST00000437681 RAD21O60216 631 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 HSD17B4P51659 736 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 ZNF792Q3KQV3 632 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 SRBD1Q8N5C6 995 aaKnown RBP13.26□□□□□ -0.29
SNHG3-202ENST00000437681 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 LCTP09848 1927 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
SNHG3-202ENST00000437681 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 CLEC4DQ8WXI8 215 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
SNHG3-202ENST00000437681 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
SNHG3-202ENST00000437681 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
SNHG3-202ENST00000437681 CYTH3O43739 400 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 STAM2O75886 525 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 DEXIO95424 95 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 MICU3Q86XE3 530 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 IWS1Q96ST2 819 aa13.26□□□□□ -0.29
SNHG3-202ENST00000437681 RAVER2Q9HCJ3 691 aaKnown RBP13.26□□□□□ -0.29
SNHG3-202ENST00000437681 ASB14A6NK59 587 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 NCAPG2Q86XI2 1143 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 PORCNQ9H237 461 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
SNHG3-202ENST00000437681 ZSWIM8A7E2V4 1837 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 HMGN5P82970 282 aaKnown RBP13.25□□□□□ -0.29
SNHG3-202ENST00000437681 FAM133AQ8N9E0 248 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 DAGLBQ8NCG7 672 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 EHMT1Q9H9B1 1298 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 BARHL2Q9NY43 387 aa13.25□□□□□ -0.29
SNHG3-202ENST00000437681 GOLGA8HP0CJ92 632 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
SNHG3-202ENST00000437681 CTGFP29279 349 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 SLC16A2P36021 539 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 AKAP17AQ02040 695 aaKnown RBP13.24□□□□□ -0.29
SNHG3-202ENST00000437681 SSRP1Q08945 709 aaKnown RBP13.24□□□□□ -0.29
SNHG3-202ENST00000437681 SLC35G1Q2M3R5 365 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
SNHG3-202ENST00000437681 TPCN1Q9ULQ1 816 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 KIF3AQ9Y496 699 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 FOSP01100 380 aaPredicted RBP13.24□□□□□ -0.29
SNHG3-202ENST00000437681 HMGCRP04035 888 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 CDC27P30260 824 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 UBXN2AP68543 259 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 PIGSQ96S52 555 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 CYP39A1Q9NYL5 469 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
SNHG3-202ENST00000437681 CPLX1O14810 134 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 PLEKHA8P1O95397 391 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 SCG2P13521 617 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 XBP1P17861 261 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 ADORA2AP29274 412 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 AP3B2Q13367 1082 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 PLS1Q14651 629 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 MAP3K21Q5TCX8 1036 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 MFSD14CQ5VZR4 134 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 CPA1P15085 419 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 NKX3-2P78367 333 aa13.23□□□□□ -0.29
SNHG3-202ENST00000437681 COL9A3Q14050 684 aaPredicted RBP13.23□□□□□ -0.29
SNHG3-202ENST00000437681 SMARCC2Q8TAQ2 1214 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms