RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 CALML3P27482 149 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 STAT3P40763 770 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 POTEEQ6S8J3 1075 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 SHISA4Q96DD7 197 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 PHF20Q9BVI0 1012 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 SPATC1LQ9H0A9 340 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 ZFYVE28Q9HCC9 887 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 RBPJLQ9UBG7 517 aa26.7■■□□□ 1.86
SMARCAL1-208ENST00000434435 ADGRA2Q96PE1 1338 aa26.69■■□□□ 1.86
SMARCAL1-208ENST00000434435 VPS37CA5D8V6 355 aaPredicted RBP26.69■■□□□ 1.86
SMARCAL1-208ENST00000434435 STX6O43752 255 aa26.69■■□□□ 1.86
SMARCAL1-208ENST00000434435 DDIT3P35638 169 aa26.69■■□□□ 1.86
SMARCAL1-208ENST00000434435 TKFCQ3LXA3 575 aa26.69■■□□□ 1.86
SMARCAL1-208ENST00000434435 TXNRD2Q9NNW7 524 aa26.69■■□□□ 1.86
SMARCAL1-208ENST00000434435 KCNJ14Q9UNX9 436 aa26.69■■□□□ 1.86
SMARCAL1-208ENST00000434435 MGAMO43451 1857 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 MMP1P03956 469 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 COPB2P35606 906 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 ADCY7P51828 1080 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 ERVK-9P63128 1117 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 ERVK-24P63145 666 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 SAFBQ15424 915 aaKnown RBP eCLIP26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 GALNT17Q6IS24 598 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 RIOX2Q8IUF8 465 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 ZMYND12Q9H0C1 365 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 BRMS1Q9HCU9 246 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 C6orf50Q9HD87 102 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 RNF146Q9NTX7 359 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 MORF4L1Q9UBU8 362 aa26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 CIZ1Q9ULV3 898 aaPredicted RBP26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 ZNFX1Q9P2E3 1918 aaKnown RBP26.68■■□□□ 1.86
SMARCAL1-208ENST00000434435 SMCO2A6NFE2 343 aa26.67■■□□□ 1.86
SMARCAL1-208ENST00000434435 CA12O43570 354 aa26.67■■□□□ 1.86
SMARCAL1-208ENST00000434435 GNA11P29992 359 aa26.67■■□□□ 1.86
SMARCAL1-208ENST00000434435 ANKRD13CQ8N6S4 541 aa26.67■■□□□ 1.86
SMARCAL1-208ENST00000434435 GLT8D2Q9H1C3 349 aa26.67■■□□□ 1.86
SMARCAL1-208ENST00000434435 HOMER2Q9NSB8 354 aa26.67■■□□□ 1.86
SMARCAL1-208ENST00000434435 PEX10O60683 326 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 SLC25A27O95847 323 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 CCNA1P78396 465 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 FAM110CQ1W6H9 321 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 GPRC5AQ8NFJ5 357 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 BICD2Q8TD16 824 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 CUL5Q93034 780 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 TRERF1Q96PN7 1200 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 MTMR6Q9Y217 621 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 RIPK3Q9Y572 518 aa26.66■■□□□ 1.86
SMARCAL1-208ENST00000434435 TLR2O60603 784 aa26.65■■□□□ 1.86
SMARCAL1-208ENST00000434435 KRT2P35908 639 aa26.65■■□□□ 1.86
SMARCAL1-208ENST00000434435 CRHR2Q13324 411 aa26.65■■□□□ 1.86
SMARCAL1-208ENST00000434435 DAGLBQ8NCG7 672 aa26.65■■□□□ 1.86
SMARCAL1-208ENST00000434435 MOV10L1Q9BXT6 1211 aaKnown RBP26.65■■□□□ 1.86
SMARCAL1-208ENST00000434435 RIC8AQ9NPQ8 531 aa26.65■■□□□ 1.86
SMARCAL1-208ENST00000434435 PCDHA4Q9UN74 947 aa26.65■■□□□ 1.86
SMARCAL1-208ENST00000434435 MRPL12P52815 198 aaKnown RBP26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 NUCB2P80303 420 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 MCF2L2Q86YR7 1114 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 TEX2Q8IWB9 1127 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 DIS3L2Q8IYB7 885 aaKnown RBP26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 BLIDQ8IZY5 108 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 CHST13Q8NET6 341 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 ACAD9Q9H845 621 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 PSTPIP2Q9H939 334 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 FBXO40Q9UH90 709 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 CPA4Q9UI42 421 aa26.64■■□□□ 1.86
SMARCAL1-208ENST00000434435 LCTP09848 1927 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 NPY5RQ15761 445 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 Q3C1V9 767 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 MUM1L1Q5H9M0 696 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 MCTP1Q6DN14 999 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 NCAPG2Q86XI2 1143 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 SHCBP1Q8NEM2 672 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 CLEC4DQ8WXI8 215 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 CHMP5Q9NZZ3 219 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 MYH7BA7E2Y1 1941 aa26.63■■□□□ 1.85
SMARCAL1-208ENST00000434435 PLXNA1Q9UIW2 1896 aa26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 NFIBO00712 420 aa26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 OPLAHO14841 1288 aa26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 ZSCAN22P10073 491 aaPredicted RBP26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 BCRP11274 1271 aa26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 GNL2Q13823 731 aaKnown RBP26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 PKP1Q13835 747 aa26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 REXO1Q8N1G1 1221 aaKnown RBP26.62■■□□□ 1.85
SMARCAL1-208ENST00000434435 CFBP00751 764 aa26.61■■□□□ 1.85
SMARCAL1-208ENST00000434435 ERCC3P19447 782 aa26.61■■□□□ 1.85
SMARCAL1-208ENST00000434435 C17orf99Q6UX52 265 aa26.61■■□□□ 1.85
SMARCAL1-208ENST00000434435 SAMD3Q8N6K7 520 aa26.61■■□□□ 1.85
SMARCAL1-208ENST00000434435 MAF1Q9H063 256 aa26.61■■□□□ 1.85
SMARCAL1-208ENST00000434435 MROH8Q9H579 483 aa26.61■■□□□ 1.85
SMARCAL1-208ENST00000434435 ZNF236Q9UL36 1845 aa26.6■■□□□ 1.85
SMARCAL1-208ENST00000434435 GCOM1H8Y6P7 765 aaPredicted RBP26.6■■□□□ 1.85
SMARCAL1-208ENST00000434435 BRD1O95696 1058 aa26.6■■□□□ 1.85
SMARCAL1-208ENST00000434435 POLR2MP0CAP2 368 aa26.6■■□□□ 1.85
SMARCAL1-208ENST00000434435 CCAR1Q8IX12 1150 aaKnown RBP26.6■■□□□ 1.85
SMARCAL1-208ENST00000434435 CFHR5Q9BXR6 569 aa26.6■■□□□ 1.85
SMARCAL1-208ENST00000434435 FOXP1Q9H334 677 aaPredicted RBP26.6■■□□□ 1.85
SMARCAL1-208ENST00000434435 BTBD18B2RXH4 712 aa26.59■■□□□ 1.85
SMARCAL1-208ENST00000434435 PIK3CDO00329 1044 aa26.59■■□□□ 1.85
SMARCAL1-208ENST00000434435 GHRHRQ02643 423 aa26.59■■□□□ 1.85
SMARCAL1-208ENST00000434435 UBE2SQ16763 222 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms