RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 ZNF408Q9H9D4 720 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
LINC01090-202ENST00000434418 WDR33Q9C0J8 1336 aaKnown RBP12.66□□□□□ -0.38
LINC01090-202ENST00000434418 ANP32CO43423 234 aa12.66□□□□□ -0.38
LINC01090-202ENST00000434418 TBC1D10BQ4KMP7 808 aaPredicted RBP12.66□□□□□ -0.38
LINC01090-202ENST00000434418 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
LINC01090-202ENST00000434418 EYA3Q99504 573 aa12.66□□□□□ -0.38
LINC01090-202ENST00000434418 MYH3P11055 1940 aa12.66□□□□□ -0.38
LINC01090-202ENST00000434418 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
LINC01090-202ENST00000434418 FANCIQ9NVI1 1328 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 H7C1D1 291 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 CELF2O95319 508 aaKnown RBP12.65□□□□□ -0.38
LINC01090-202ENST00000434418 HSP90B1P14625 803 aaKnown RBP12.65□□□□□ -0.38
LINC01090-202ENST00000434418 ELNP15502 786 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 CTSWP56202 376 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 DLK2Q6UY11 383 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 ANKRD18AQ8IVF6 992 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 TMEM151AQ8N4L1 468 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 SLC7A3Q8WY07 619 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 CAPNS2Q96L46 248 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 DUSP9Q99956 384 aaKnown RBP12.65□□□□□ -0.38
LINC01090-202ENST00000434418 CHMP4AQ9BY43 222 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 OSBPL7Q9BZF2 842 aa12.65□□□□□ -0.38
LINC01090-202ENST00000434418 WTIPA6NIX2 430 aaPredicted RBP12.64□□□□□ -0.39
LINC01090-202ENST00000434418 TM4SF5O14894 197 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 FSCN2O14926 492 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
LINC01090-202ENST00000434418 ITGB2P05107 769 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
LINC01090-202ENST00000434418 CHRNA4P43681 627 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 NEXNQ0ZGT2 675 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
LINC01090-202ENST00000434418 GREM2Q9H772 168 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
LINC01090-202ENST00000434418 IL16Q14005 1332 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 TMEM238LA0A1B0GVL6 79 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 SELPP16109 830 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 CTCFP49711 727 aaPredicted RBP12.63□□□□□ -0.39
LINC01090-202ENST00000434418 LBX1P52954 281 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 FCGRTP55899 365 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 ZNF576Q9H609 170 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 PGAP2Q9UHJ9 254 aa12.63□□□□□ -0.39
LINC01090-202ENST00000434418 XDHP47989 1333 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 DLL1O00548 723 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
LINC01090-202ENST00000434418 AOC2O75106 756 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 ERCC3P19447 782 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 ITPKAP23677 461 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 ECE1P42892 770 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 IKBKEQ14164 716 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 FOXD4L6Q3SYB3 417 aaPredicted RBP12.62□□□□□ -0.39
LINC01090-202ENST00000434418 FAM117BQ6P1L5 589 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 FOXD4L3Q6VB84 417 aaPredicted RBP12.62□□□□□ -0.39
LINC01090-202ENST00000434418 CDC37L1Q7L3B6 337 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 SAPCD2Q86UD0 394 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 ALYREFQ86V81 257 aaKnown RBP12.62□□□□□ -0.39
LINC01090-202ENST00000434418 TTLL11Q8NHH1 800 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 DPF2Q92785 391 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 KLHDC7BQ96G42 594 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
LINC01090-202ENST00000434418 KCNK4Q9NYG8 393 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 PSME4Q14997 1843 aa12.62□□□□□ -0.39
LINC01090-202ENST00000434418 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
LINC01090-202ENST00000434418 ADM5C9JUS6 153 aa12.61□□□□□ -0.39
LINC01090-202ENST00000434418 DDX3YO15523 660 aaKnown RBP12.61□□□□□ -0.39
LINC01090-202ENST00000434418 HSPA8P11142 646 aaKnown RBP12.61□□□□□ -0.39
LINC01090-202ENST00000434418 ESRRAP11474 423 aaPredicted RBP12.61□□□□□ -0.39
LINC01090-202ENST00000434418 RPS12P25398 132 aaKnown RBP12.61□□□□□ -0.39
LINC01090-202ENST00000434418 MAP2K1Q02750 393 aaPredicted RBP12.61□□□□□ -0.39
LINC01090-202ENST00000434418 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
LINC01090-202ENST00000434418 PCDH1Q08174 1060 aa12.61□□□□□ -0.39
LINC01090-202ENST00000434418 KIF4BQ2VIQ3 1234 aa12.61□□□□□ -0.39
LINC01090-202ENST00000434418 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
LINC01090-202ENST00000434418 CLEC4MQ9H2X3 399 aaPredicted RBP12.61□□□□□ -0.39
LINC01090-202ENST00000434418 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
LINC01090-202ENST00000434418 VIL1P09327 827 aaKnown RBP12.6□□□□□ -0.39
LINC01090-202ENST00000434418 GCKRQ14397 625 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 ZNF423Q2M1K9 1284 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 KRT26Q7Z3Y9 468 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 CD163Q86VB7 1156 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 DNAAF4Q8WXU2 420 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 FAM161BQ96MY7 647 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
LINC01090-202ENST00000434418 F6X3S4 739 aa12.59□□□□□ -0.39
LINC01090-202ENST00000434418 ADAM11O75078 769 aa12.59□□□□□ -0.39
LINC01090-202ENST00000434418 VAMP4O75379 141 aa12.59□□□□□ -0.39
LINC01090-202ENST00000434418 PLA2G4EQ3MJ16 856 aa12.59□□□□□ -0.39
LINC01090-202ENST00000434418 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
LINC01090-202ENST00000434418 SRA1Q9HD15 236 aaKnown RBP12.59□□□□□ -0.39
LINC01090-202ENST00000434418 PARP2Q9UGN5 583 aa12.59□□□□□ -0.39
LINC01090-202ENST00000434418 MINPP1Q9UNW1 487 aa12.59□□□□□ -0.39
LINC01090-202ENST00000434418 ZNF646O15015 1829 aaPredicted RBP12.58□□□□□ -0.4
LINC01090-202ENST00000434418 CACNA1FO60840 1977 aa12.58□□□□□ -0.4
LINC01090-202ENST00000434418 C1QTNF9BB2RNN3 333 aa12.58□□□□□ -0.4
LINC01090-202ENST00000434418 KLRK1P26718 216 aa12.58□□□□□ -0.4
LINC01090-202ENST00000434418 GNA15P30679 374 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms