RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 TAF1P21675 1872 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 TRAPPC10P48553 1259 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 C12orf60Q5U649 245 aa13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 THOC1Q96FV9 657 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 BAZ2AQ9UIF9 1905 aaKnown RBP13.67□□□□□ -0.22
SEMA3F-206ENST00000434342 KCNJ18B7U540 433 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 RNF225M0QZC1 329 aaPredicted RBP13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 KRT9P35527 623 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 KCNJ12Q14500 433 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 CNGA4Q8IV77 575 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 ABL1P00519 1130 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 NF2P35240 595 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 COPB1P53618 953 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 HSP90B2PQ58FF3 399 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
SEMA3F-206ENST00000434342 MYO1FO00160 1098 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 SBK1Q52WX2 424 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 FAM204AQ9H8W3 233 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 VEZTQ9HBM0 779 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 DDX60Q8IY21 1712 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 EME2A4GXA9 379 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 RPS6KA4O75676 772 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 AP1G2O75843 785 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 BAG3O95817 575 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 RFC4P35249 363 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 ACTN3Q08043 901 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 LETM2Q2VYF4 491 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 DGKHQ86XP1 1220 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 DOT1LQ8TEK3 1739 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 KIFC2Q96AC6 838 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 MKRN1Q9UHC7 482 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 CYTH3O43739 400 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 LONP1P36776 959 aaKnown RBP13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 CCNHP51946 323 aaPredicted RBP13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 TCP11X2Q5H9J9 407 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 RWDD2AQ9UIY3 292 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 CAPN7Q9Y6W3 813 aa13.65□□□□□ -0.22
SEMA3F-206ENST00000434342 CICQ96RK0 1608 aaPredicted RBP13.65□□□□□ -0.23
SEMA3F-206ENST00000434342 KLRF2D3W0D1 207 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 BARGINQ6ZT62 677 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 CEP57Q86XR8 500 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 TRIM47Q96LD4 638 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 TMEM47Q9BQJ4 181 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 DISC1Q9NRI5 854 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 RMND1Q9NWS8 449 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 COL14A1Q05707 1796 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 USP8P40818 1118 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 NAPAP54920 295 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 USP17L2Q6R6M4 530 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 WDR66Q8TBY9 1149 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 TIAM2Q8IVF5 1701 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 TM4SF1P30408 202 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 PBX1P40424 430 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 PYM1Q9BRP8 204 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 NAA15Q9BXJ9 866 aaKnown RBP13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 MAD2L2Q9UI95 211 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
SEMA3F-206ENST00000434342 SPAG1Q07617 926 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 SLC35F6Q8N357 371 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 PCMTD1Q96MG8 357 aaPredicted RBP13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 CHP1Q99653 195 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 EHD4Q9H223 541 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 GNAQP50148 359 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 ERVK-24P63145 666 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 SNX1Q13596 522 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 CCDC178Q5BJE1 867 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 GOLGA1Q92805 767 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 UBA5Q9GZZ9 404 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 ABHD10Q9NUJ1 306 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 ATP8B1O43520 1251 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 CHMP4BP1P59074 171 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 GPR161Q8N6U8 529 aaKnown RBP13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 GDAP1L1Q96MZ0 367 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 ODF2LQ9ULJ1 636 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 SAMM50Q9Y512 469 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 FAM169AQ9Y6X4 670 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 NHSL1Q5SYE7 1610 aa13.63□□□□□ -0.23
SEMA3F-206ENST00000434342 CHD4Q14839 1912 aa13.62□□□□□ -0.23
SEMA3F-206ENST00000434342 PSMD2Q13200 908 aa13.62□□□□□ -0.23
SEMA3F-206ENST00000434342 NAALADL2Q58DX5 795 aa13.62□□□□□ -0.23
SEMA3F-206ENST00000434342 TMTC1Q8IUR5 882 aa13.62□□□□□ -0.23
SEMA3F-206ENST00000434342 CCDC148Q8NFR7 591 aa13.62□□□□□ -0.23
SEMA3F-206ENST00000434342 TRIM6Q9C030 488 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms